Cited in
(82)- NetRAX
- Relative Optimality Conditions and Algorithms for Treespace Fréchet Means
- The probability distribution of ranked gene trees on a species tree
- Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
- wQFM
- QT-GILD: Quartet based gene tree imputation using deep learning improves phylogenomic analyses despite missing data
- Large-Scale Multiple Sequence Alignment and Phylogeny Estimation
- ReCombinatorics
- Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss
- PhySIC
- DupTree
- DPRml
- NAST
- Statalign
- GRAPPA
- ASTRID
- NINJA
- SIESTA
- TNT
- ASTRAL-II
- PhyloNet
- Dendroscope
- PROMALS
- MulRF
- GRIMM
- Mtreemix
- STEM-hy
- ecceTERA
- FastTree
- ANGES
- ALPHA
- BitPhylogeny
- DACTAL
- ExaML
- FastRFS
- GARLI
- GATC
- GIGA
- GASTS
- FISHtrees
- iGLASS
- L.U.St
- HyDe
- MetaPIGA
- MOLPHY
- MLGO
- OMICtools
- NJMerge
- OCTAL
- MCScanX
- Phylogeny.fr
- MURPAR
- Proteinortho
- ProCARs
- RAxML-Light
- Quartets MaxCut
- PhyloNetworks
- Rec-I-DCM3
- S-Cluster++
- SuperTriplets
- SuperFine
- SVDquest
- UFBoot2
- Triplet MaxCut
- StarBEAST2
- DynaDup
- MSCquartets
- TriLoNet
- COBALT
- FASTSP
- GapCoder
- Gegenees
- MSACompro
- POY
- SATCHMO-JS
- SPEM
- Determining species tree topologies from clade probabilities under the coalescent
- Species tree estimation under joint modeling of coalescence and duplication: sample complexity of quartet methods
- QT-GILD
- Split probabilities and species tree inference under the multispecies coalescent model
- Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent
- On the effect of intralocus recombination on triplet-based species tree estimation
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