Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss
From MaRDI portal
Publication:5041802
DOI10.1007/978-3-030-45257-5_8zbMATH Open1500.92056OpenAlexW3128968985MaRDI QIDQ5041802FDOQ5041802
Sebastien Roch, Tandy J. Warnow, Erin K. Molloy, Brandon Legried
Publication date: 14 October 2022
Published in: Lecture Notes in Computer Science (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1007/978-3-030-45257-5_8
Cites Work
- Title not available (Why is that?)
- Comparison of phylogenetic trees
- The coalescent
- Identifying the rooted species tree from the distribution of unrooted gene trees under the coalescent
- Reconstructing the shape of a tree from observed dissimilarity data
- Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent
- The gene evolution model and computing its associated probabilities
- Species Trees from Gene Trees Despite a High Rate of Lateral Genetic Transfer: A Tight Bound (Extended Abstract)
Cited In (4)
- Species tree estimation under joint modeling of coalescence and duplication: sample complexity of quartet methods
- Statistically consistent rooting of species trees under the multispecies coalescent model
- Comparing methods for species tree estimation with gene duplication and loss
- Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models
Uses Software
Recommendations
- Reconciling a gene tree to a species tree under the duplication cost model 👍 👎
- Gene tree correction for reconciliation and species tree inference: complexity and algorithms 👍 👎
- Computing the probability of gene trees concordant with the species tree in the multispecies coalescent 👍 👎
- Statistically consistent rooting of species trees under the multispecies coalescent model 👍 👎
- Probabilistic reconstruction of genealogies for polyploid plant species 👍 👎
- Species tree estimation under joint modeling of coalescence and duplication: sample complexity of quartet methods 👍 👎
- Comparing methods for species tree estimation with gene duplication and loss 👍 👎
This page was built for publication: Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5041802)
