Markov invariants, plethysms, and phylogenetics
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Publication:1795261
DOI10.1016/j.jtbi.2008.04.001zbMath1398.92188arXiv0711.3503OpenAlexW1966879721WikidataQ58468296 ScholiaQ58468296MaRDI QIDQ1795261
M. A. Charleston, Jeremy G. Sumner, Peter D. Jarvis, Lars S. Jermiin
Publication date: 16 October 2018
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/0711.3503
Trees (05C05) Problems related to evolution (92D15) Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20)
Related Items (13)
Markov invariants and the isotropy subgroup of a quartet tree ⋮ Quantum channel simulation of phylogenetic branching models ⋮ Matrix group structure and Markov invariants in the strand symmetric phylogenetic substitution model ⋮ Developing a statistically powerful measure for quartet tree inference using phylogenetic identities and Markov invariants ⋮ Evaluation of the relative performance of the subflattenings method for phylogenetic inference ⋮ Designing weights for quartet-based methods when data are heterogeneous across lineages ⋮ The algebra of the general Markov model on phylogenetic trees and networks ⋮ An algebraic analysis of the two state Markov model on tripod trees ⋮ An algebraic view of bacterial genome evolution ⋮ ADVENTURES IN INVARIANT THEORY ⋮ Dimensional reduction for the general Markov model on phylogenetic trees ⋮ Lie Markov models ⋮ Systematics and symmetry in molecular phylogenetic modelling: perspectives from physics
Uses Software
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