swMATH7694MaRDI QIDQ19711FDOQ19711
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Official website: http://evolution.genetics.washington.edu/phylip.html
Cited In (only showing first 100 items - show all)
- Probability Steiner trees and maximum parsimony in phylogenetic analysis
- A complexity-based measure and its application to phylogenetic analysis
- Distributed and sequential algorithms for bioinformatics
- Group-theoretic models of the inversion process in bacterial genomes
- Title not available (Why is that?)
- Phylogenetic analysis of DNA sequences based on the generalized pseudo-amino acid composition
- Adaptive memory programming: local search parallel algorithms for phylogenetic tree construc\-tion
- Information categorization approach to literary authorship disputes
- Numerical characteristics of word frequencies and their application to dissimilarity measure for sequence comparison
- Concentration inequality for evolutionary trees
- PTreeRec: Phylogenetic Tree Reconstruction based on genome BLAST distance
- Data mining in bioinformatics
- Increased accuracy in analytical molecular distance estimation
- Analysis and visualization of seismic data using mutual information
- A tabu search algorithm for maximum parsimony phylogeny inference
- Comparative genomic analysis by microbial COGs self-attraction rate
- Generation of the exact distribution and simulation of matched nucleotide sequences on a phylogenetic tree
- Supervised learning algorithms for multi-class classification problems with partial class memberships
- Spectral distortion measures for biological sequence comparisons and database searching
- Genome analysis with the conditional multinomial distribution profile
- A universal scaling law determines time reversibility and steady state of substitutions under selection
- LVB
- Sequence comparison via polar coordinates representation and curve tree
- Bioinformatics and the Cell
- Sequence similarity measures based on bounded Hamming distance
- Reversible polymorphism-aware phylogenetic models and their application to tree inference
- WSE, a new sequence distance measure based on word frequencies
- Alignments of mitochondrial genome arrangements: applications to metazoan phylogeny
- Linear regression model of short \(k\)-word: a similarity distance suitable for biological sequences with various lengths
- Non-hereditary maximum parsimony trees
- Extraction of high quality \(k\)-words for alignment-free sequence comparison
- Majority-rule (+) consensus trees
- Multidimensional cluster stability analysis from a Brazilian Bradyrhizobium sp. RFLP/PCR data set
- Why neighbor-joining works
- Comparing evolutionary distances via adaptive distance functions
- Study of LZ-word distribution and its application for sequence comparison
- Surnames in Western Europe: a comparison of the subcontinental populations through isonymy
- Statistics for phylogenetic trees
- Genetic relationship between Kangal, Akbash and other dog populations
- Better greedy sequence clustering with fast banded alignment
- Phylogenetic inference from binary sequences reduced by primary DNA sequences
- A faster construction of greedy consensus trees
- Inferring phylogenetic trees using answer set programming
- RNA sequence, structure, and function: computational and bioinformatic methods
- Markov invariants, plethysms, and phylogenetics
- Analysis of phylogenetics and evolution with R
- Rphylip
- ASTRAL-Pro
- FastMulRFS
- Surnames and dialects in France: population structure and cultural evolution
- A new distributed alignment-free approach to compare whole proteomes
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
- Robust classifying of prokaryotic genomes
- Phylogenetic analysis of DNA sequences with a novel characteristic vector
- Financial time series analysis based on information categorization method
- A novel approach to phylogenetic trees: d‐Dimensional geometric Steiner trees
- A novel statistical measure for sequence comparison on the basis of \(k\)-word counts
- PULLPRU: a practical approach to estimate phylogenies from single nucleotide polymorphism haplotypes under the maximum parsimony criterion
- Integer linear programming as a tool for constructing trees from quartet data
- Geometry of the space of phylogenetic trees
- Constructing rooted supertrees using distances
- Minimum tree cost quartet puzzling
- TreeOfTrees method to evaluate the congruence between gene trees
- EdiPy: A resource to simulate the evolution of plant mitochondrial genes under the RNA editing
- TreeSOM: cluster analysis in the self-organizing map
- Bayesian analysis of elapsed times in continuous‐time Markov chains
- Inferring evolutionary trees with strong combinatorial evidence
- A fixed-parameter algorithm for minimum quartet inconsistency
- PyPop
- ape
- fastDNAml
- MEGA4
- MrBayes
- RAxML
- PAUP*
- BIONJ
- FindSteinerTree
- Clustal
- EPoS
- LASER
- MAFFT
- MODELTEST
- phangorn
- Seq-Gen
- Notung
- MEGA
- PTreeRec
- bioperl
- Gaphyl
- Cluster-C
- PAML
- PhyML
- Arlequin
- ClustalW
- CLUSTAL
- pIQPNNI
- SplitsTree
- DASACT
- Phyloquart
- SOM_PAK
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