PHYLIP

swMATH7694MaRDI QIDQ19711FDOQ19711

Author name not available (Why is that?)

Cited In (88)

• Cluster analysis of the large natural satellites in the solar system
• Numerical characteristics of word frequencies and their application to dissimilarity measure for sequence comparison
• Heterogeneity in DNA Multiple Alignments: Modeling, Inference, and Applications in Motif Finding
• A universal scaling law determines time reversibility and steady state of substitutions under selection
• Modeling Dependence in Evolutionary Inference for Proteins
• Likelihood-mapping: A simple method to visualize phylogenetic content of a sequence alignment
• Bioinformatics and the Cell
• A New Algorithm for Inferring Hybridization Events Based on the Detection of Horizontal Gene Transfers
• Alignments of mitochondrial genome arrangements: applications to metazoan phylogeny
• Comparing evolutionary distances via adaptive distance functions
• Registering the evolutionary history in individual-based models of speciation
• Comparison of protein secondary structures based on backbone dihedral angles
• Consistency and inconsistency of consensus methods for inferring species trees from gene trees in the presence of ancestral population structure
• Bootstrapping Algorithms for Gene Duplication and Speciation Events
• Vertebrate 2xRBD hnRNP proteins: a comparative analysis of genome, mRNA and protein sequences
• Error Detection and Correction of Gene Trees
• Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
• Tumor classification using phylogenetic methods on expression data
• On finding the Adams consensus tree
• The gene expression matrix: Towards the extraction of genetic network architectures
• Andalò di Negro's \textit{De compositione astrolabii}: a critical edition with English translation and notes
• Constructing Camin-Sokal Phylogenies Via Answer Set Programming
• Multidimensional scaling analysis of the solar system objects
• A novel statistical measure for sequence comparison on the basis of \(k\)-word counts
• PULLPRU: a practical approach to estimate phylogenies from single nucleotide polymorphism haplotypes under the maximum parsimony criterion
• Artificial sequences and complexity measures
• Probability Steiner trees and maximum parsimony in phylogenetic analysis
• Geometry of the space of phylogenetic trees
• Constructing rooted supertrees using distances
• Analysis of Phylogenetics and Evolution with R
• A complexity-based measure and its application to phylogenetic analysis
• Distributed and sequential algorithms for bioinformatics
• Minimum tree cost quartet puzzling
• TreeOfTrees method to evaluate the congruence between gene trees
• EdiPy: A resource to simulate the evolution of plant mitochondrial genes under the RNA editing
• TreeSOM: cluster analysis in the self-organizing map
• Group-theoretic models of the inversion process in bacterial genomes
• Title not available (Why is that?)
• Phylogenetic analysis of DNA sequences based on the generalized pseudo-amino acid composition
• Adaptive memory programming: local search parallel algorithms for phylogenetic tree construc\-tion
• Information categorization approach to literary authorship disputes
• Concentration inequality for evolutionary trees
• PTreeRec: Phylogenetic Tree Reconstruction based on genome BLAST distance
• Data mining in bioinformatics
• Bayesian analysis of elapsed times in continuous‐time Markov chains
• Increased accuracy in analytical molecular distance estimation
• Analysis and visualization of seismic data using mutual information
• Title not available (Why is that?)
• A tabu search algorithm for maximum parsimony phylogeny inference
• Comparative genomic analysis by microbial COGs self-attraction rate
• Generation of the exact distribution and simulation of matched nucleotide sequences on a phylogenetic tree
• Supervised learning algorithms for multi-class classification problems with partial class memberships
• Spectral distortion measures for biological sequence comparisons and database searching
• Title not available (Why is that?)
• Genome analysis with the conditional multinomial distribution profile
• Sequence comparison via polar coordinates representation and curve tree
• Sequence similarity measures based on bounded Hamming distance
• Inferring evolutionary trees with strong combinatorial evidence
• Reversible polymorphism-aware phylogenetic models and their application to tree inference
• WSE, a new sequence distance measure based on word frequencies
• A fixed-parameter algorithm for minimum quartet inconsistency
• Linear regression model of short \(k\)-word: a similarity distance suitable for biological sequences with various lengths
• Non-hereditary maximum parsimony trees
• Extraction of high quality \(k\)-words for alignment-free sequence comparison
• Majority-rule (+) consensus trees
• Multidimensional cluster stability analysis from a Brazilian Bradyrhizobium sp. RFLP/PCR data set
• Why neighbor-joining works
• Study of LZ-word distribution and its application for sequence comparison
• Surnames in Western Europe: a comparison of the subcontinental populations through isonymy
• Statistics for phylogenetic trees
• Title not available (Why is that?)
• Genetic relationship between Kangal, Akbash and other dog populations
• Phylogenetic inference from binary sequences reduced by primary DNA sequences
• Inferring phylogenetic trees using answer set programming
• RNA sequence, structure, and function: computational and bioinformatic methods
• Markov invariants, plethysms, and phylogenetics
• DASACT: a decision aiding software for axiomatic consensus theory
• Surnames and dialects in France: population structure and cultural evolution
• Polyhedral geometry of phylogenetic rogue taxa
• A new distributed alignment-free approach to compare whole proteomes
• Bioinformatics. Volume I. Data, sequence analysis, and evolution
• Robust classifying of prokaryotic genomes
• Probabilistic models in cluster analysis
• Bootstrap confidence levels for phylogenetic trees
• Phylogenetic analysis of DNA sequences with a novel characteristic vector
• Financial time series analysis based on information categorization method
• A novel approach to phylogenetic trees: d‐Dimensional geometric Steiner trees
• Integer linear programming as a tool for constructing trees from quartet data

This page was built for software: PHYLIP