DNA topology

zbMATH Open1180.92024MaRDI QIDQ3637587FDOQ3637587

Authors: Dorothy Buck 

Publication date: 13 July 2009

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zbMATH Keywords

knot theorylinking numbermolecular biologytangle modelDNA supercoilingtopoisomeraseDNA knotssite-specific recombinations

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)

Cited In (25)

• Topologically non-linked circular duplex DNA
• DNA topology in chromosomes: a quantitative survey and its physiological implications
• Regulation of DNA topology by topoisomerases: mathematics at the molecular level
• Tops and writhing DNA
• Distributions of knots and links in circular DNA
• Developments in Language Theory
• A model of DNA unwinding dynamics by the RecBCD complex and its regulation by Chi recognition
• DNA, knots and tangles
• DNA topology: experiments and analysis
• And I say to myself: ``What a fractional world!
• Introduction to DNA topology
• Modelling state transitions in knot space motivated by type II topoisomerase action
• A topological characterization of the products arising from site-specific recombination on \(T(2,n) \# C(2,r)\) DNA substrates
• Title not available (Why is that?)
• Reactions mediated by topoisomerases and other enzymes: modelling localised DNA transformations
• Topological analysis of Mu-transposition
• An algebraic view of bacterial genome evolution
• Title not available (Why is that?)
• Topological Process of Splitting DNA-Links
• Models of random knots
• Title not available (Why is that?)
• Equilibrium distributions of topological states in circular DNA: Interplay of supercoiling and knotting
• Topological chirality of a type of DNA and protein polyhedral links
• Topological model for recombination of DNA and RNA
• The classification of rational subtangle replacements between rational tangles

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