Fitting Markov Chain Models to Discrete State Series such as DNA Sequences
DOI10.1111/1467-9876.00139zbMATH Open0928.62106OpenAlexW2132996374MaRDI QIDQ4244205FDOQ4244205
Authors: P. J. Avery, Daniel A. Henderson
Publication date: 20 July 1999
Published in: Journal of the Royal Statistical Society Series C: Applied Statistics (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1111/1467-9876.00139
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Applications of statistics to biology and medical sciences; meta analysis (62P10) Contingency tables (62H17) Protein sequences, DNA sequences (92D20) Markov chains (discrete-time Markov processes on discrete state spaces) (60J10)
Cited In (16)
- A discrete autoregressive process as a model for short-range correlations in DNA sequences
- Semiparametric smoothing of sparse contingency tables
- Validation and Discovery in Markov Models of Genetics Data
- Investigating some attributes of periodicity in DNA sequences via semi-Markov modelling
- Global Markov models for eukaryote nucleotide data
- Analysing grouping of nucleotides in DNA sequences using lumped processes constructed from Markov chains
- Pairwise likelihood inference for ordinal categorical time series
- Fitting DNA sequences through log-linear modelling with linear constraints
- Testing the order of Markov dependence in DNA sequences
- Drifting Markov models with polynomial drift and applications to DNA sequences
- Joint distribution of \(k\)-tuple statistics in zero-one sequences of Markov-dependent trials
- ML, PL, QL in Markov Chain Models
- Exact goodness-of-fit tests for Markov chains
- Exact significance test for Markov order
- High-order extensions of the Double Chain Markov Model
- Fitting Markov property to genetic sequences
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