scientific article; zbMATH DE number 4116364

MaRDI QIDQ4731049zbMATH OpenFDO

Authors Simon Tavaré, Barton W. Giddings

Publication date 1989

zbMATH Keywords

Bayesian information criterionFourier analysis of periodicityhigh order dependencehigh order Markov chainshuman zeta-globinlambda phageRaftery's methodstatistics of DNA sequencesWalsh transformsXenopus laevis 5s DNA

Mathematics Subject Classification ID

Applications of Markov chains and discrete-time Markov processes on general state spaces (social mobility, learning theory, industrial processes, etc.) (60J20) Genetics and epigenetics (92D10)

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• Codon preference and primary sequence structure in protein-coding regions
• Poisson, compound Poisson and process approximations for testing statistical significance in sequence comparisons
• The spectral envelope and its applications.
• Lévy statistics in coding and non-coding nucleotide sequences
• Statistical properties and fractals of nucleotide clusters in DNA sequences
• The gene-orientation structure of eukaryotes
• Analysing grouping of nucleotides in DNA sequences using lumped processes constructed from Markov chains
• The distributions of the frequency of occurrence of nucleotide subsequences
• LOGIT ANALYSIS OF GENETIC DATA
• Statistical analysis of biological sequences: Markov modelling, alignments and motifs
• The statistical analysis of direct repeats in nucleic acid sequences
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• Nucleotide sequences versus Markov models
• Hidden Markov chains and the analysis of genome structure
• Fitting Markov Chain Models to Discrete State Series such as DNA Sequences
• Statistical analysis of DNA sequence data: a brief review
• Auto-selection order of Markov chain for background sequences with chi-square test
• Investigating some attributes of periodicity in DNA sequences via semi-Markov modelling
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