On the Power of Profiles for Transcription Factor Binding Site Detection

DOI10.2202/1544-6115.1032zbMATH Open1038.92019OpenAlexW1986841498WikidataQ51942781 ScholiaQ51942781MaRDI QIDQ4459290FDOQ4459290

Authors: Sven Rahmann, Tobias Müller, Martin Vingron 

Publication date: 28 March 2004

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: http://www.bepress.com/sagmb/vol2/iss1/art7/

Recommendations

• A transdimensional Bayesian model for pattern recognition in DNA sequences
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Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40)

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• Probabilistic Arithmetic Automata and Their Application to Pattern Matching Statistics
• Fast profile matching algorithms - A survey
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• Establishing a statistic model for recognition of steroid hormone response elements
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• Evaluation of phylogenetic footprinting and its application for improved prediction of transcription factor binding sites
• Confidently estimating the number of DNA replication origins

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