Establishing a statistic model for recognition of steroid hormone response elements

DOI10.1016/J.COMPBIOLCHEM.2006.07.002zbMATH Open1118.92030DBLPjournals/candc/StepanovaLL06OpenAlexW2069827111WikidataQ52840768 ScholiaQ52840768MaRDI QIDQ883819FDOQ883819

Valerie C.-L. Lin, Maria Stepanova, Geng Lin

Publication date: 12 June 2007

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2006.07.002

zbMATH Keywords

hidden Markov modelgene regulationgenome-wide analysishormone response elementposition weight matrixprimary target geneprogesteronestatistic modelsteroid hormone

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Physiology (general) (92C30)

Cites Work

• Reconstruction of large phylogenetic trees: a parallel approach
• Pattern-constrained multiple polypeptide sequence alignment
• On the Power of Profiles for Transcription Factor Binding Site Detection

Uses Software

• JASPAR
• MatInspector
• MATCH

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