Pattern-constrained multiple polypeptide sequence alignment

DOI10.1016/J.COMPBIOLCHEM.2005.06.002zbMATH Open1102.92017OpenAlexW2044025344WikidataQ80417730 ScholiaQ80417730MaRDI QIDQ2500332FDOQ2500332

Authors: Zhihua Du, Feng Lin 

Publication date: 23 August 2006

Published in: Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.compbiolchem.2005.06.002

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zbMATH Keywords

Multiple sequence alignmentRegular expressionStructural informationDomain knowledgeProsite databank

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Computational methods for problems pertaining to biology (92-08)

Cites Work

• The Multiple Sequence Alignment Problem in Biology
• A survey of multiple sequence comparison methods
• Comparison of biosequences
• Multiple DNA and protein sequence alignment based on segment-to-segment comparison.

Cited In (3)

• Establishing a statistic model for recognition of steroid hormone response elements
• Statistical Methods for Identifying Conserved Residues in Multiple Sequence Alignment
• Multiple protein sequence alignment using double-dynamic programming

Uses Software

• MAFFT
• ClustalW
• MUSCLE
• PSI-BLAST
• BLAST
• Pfam

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