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swMATH18502MaRDI QIDQ30342FDOQ30342

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Cited In (23)

• Self-overlapping Occurrences and Knuth-Morris-Pratt Algorithm for Weighted Matching
• Gene regulatory networks. Methods and protocols
• Fast profile matching algorithms - A survey
• Detection of over-represented motifs corresponding to known TFBSs via motif clustering and matching
• On-Line Pattern Matching on Uncertain Sequences and Applications
• Streaming \(k\)-mismatch with error correcting and applications
• Graph centrality based prediction of cancer genes
• Identification of specific sequence motifs in the upstream region of 242 human miRNA genes
• Cross-species network and transcript transfer
• Establishing a statistic model for recognition of steroid hormone response elements
• Theory on the looping mediated directional-dependent propulsion of transcription factors along DNA
• A posterior probability approach for gene regulatory network inference in genetic perturbation data
• Transcription factor binding sites detection by using alignment-based approach
• Discovering cis-regulatory modules by optimizing barbecues
• Computational studies on Alzheimer's disease associated pathways and regulatory patterns using microarray gene expression and network data: revealed association with aging and other diseases
• Construction of minimal deterministic finite automata from biological motifs
• Self-organizing neural networks to support the discovery of DNA-binding motifs
• Regulatory Signals in Genomic Sequences
• Computational genomics with R. With the assistance of Verdan Franke, Bora Uyar and Jonathan Ronen
• Transcription factor-binding site identification and gene classification via fusion of the supervised-weighted discrete kernel clustering and support vector machine
• Detection-theoretic analysis of MatInspector
• Algorithms for learning parsimonious context trees
• Seed-driven learning of position probability matrices from large sequence sets

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