Cited in
(89)- Gene regulatory networks. Methods and protocols
- Statistical genomics. Methods and protocols
- Cross-species network and transcript transfer
- PHENIX
- GOSim
- Spectronet
- VCFtools
- MEME
- PRALINE
- BioMart
- SnpEff
- ANNOVAR
- BSgenome
- BEDTools
- IGV
- rBiopaxParser
- YACOP
- BIPS
- CONREAL
- InteroPORC
- JASPAR
- modMine
- Consed
- ORegAnno
- rVISTA
- UniPROBE
- STRAP
- AMoRe
- AceView
- Coot
- CLAP
- CATH
- BRIG
- Cgaln
- CINEMA
- CGView
- BioStar
- BMGE
- GFF-Ex
- Conrad
- CONTRAST
- Dotlet
- CLANN
- CRITICA
- EVEREST
- Ensembl REST
- FunTree
- FRESCO
- Gene3D
- HAMAP
- ExaBayes
- kClust
- GtRNAdb
- GeneMarkS
- GOLD
- MOLREP
- JDotter
- Hetero
- M-GCAT
- jModelTest
- MATCH
- MEME-LaB
- LDDist
- ModuleMaster
- mGene
- MOCAT
- OrthoDB
- RamiGO
- NextGenMap
- PIRSF
- PHYLO_WIN
- piRNABank
- piRBase
- piRNAQuest
- PhyloBayes 3
- PhyloBayes MPI
- SEAVIEW
- Savant Genome Browser
- REGANOR
- RDP2
- SeqVis
- STRait Razor
- Stampy
- TICO
- TOPAL
- ZCURVE
- Strelka
- Identifying potential regulatory elements by transcription factor binding site alignment using partial order graphs
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
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