BEDTools
From MaRDI portal
Cited in
(only showing first 100 items - show all)- FEXACT
- Quantifying local randomness in human DNA and RNA sequences using Erdös motifs
- GOSim
- Spectronet
- Soap
- Biostrings
- VCFtools
- Samtools
- PRALINE
- regioneR
- Galaxy
- FastQC
- BioMart
- YACOP
- IGV
- AnnotationHub
- MEDIPS
- FIMO
- featureCounts
- rBiopaxParser
- WebGestalt
- Statistical genomics. Methods and protocols
- ReadDepth
- Consed
- g Profiler
- chequeR
- MMDiff
- STRAP
- PuFFIN
- STRait Razor
- AMoRe
- MOLREP
- Coot
- GFF-Ex
- RamiGO
- kClust
- CLAP
- EVEREST
- CATH
- HAMAP
- PIRSF
- OrthoDB
- FunTree
- Gene3D
- SEAVIEW
- PHYLO_WIN
- CINEMA
- Cgaln
- FRESCO
- BRIG
- CGView
- Dotlet
- JDotter
- M-GCAT
- modENCODE
- AceView
- GtRNAdb
- Savant Genome Browser
- MEME-LaB
- piRNABank
- piRBase
- piRNAQuest
- ModuleMaster
- MATCH
- Stampy
- NextGenMap
- Ensembl REST
- BioStar
- TICO
- CRITICA
- GeneMarkS
- ZCURVE
- MOCAT
- GOLD
- Conrad
- CONTRAST
- mGene
- REGANOR
- jModelTest
- PhyloBayes 3
- SeqVis
- LDDist
- RDP2
- PhyloBayes MPI
- Hetero
- CLANN
- TOPAL
- BEETL
- jaccard
- EC-BLAST
- LOLA
- diffReps
- ChIPDiff
- ThIEF
- DGW
- MONKEY
- Comparing DNA sequence collections by direct comparison of compressed text indexes
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
- ThIEF: finding genome-wide trajectories of epigenetics marks
- SomaticSignatures
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