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From MaRDI portal
Cited in
(only showing first 100 items - show all)- BM-map: Bayesian mapping of multireads for next-generation sequencing data
- Global and local sequence alignment with a bounded number of gaps
- Comparative assessment of alignment algorithms for NGS data: features, considerations, implementations, and future
- Multi-pattern matching with bidirectional indexes
- Extending alignments with k-mismatches and -gaps
- Algorithmic Framework for Approximate Matching Under Bounded Edits with Applications to Sequence Analysis
- Efficient construction of a complete index for pan-genomics read alignment
- Computing the multi-string BWT and LCP array in external memory
- An algorithm for mapping short reads to a dynamically changing genomic sequence
- Approximate all-pairs suffix/prefix overlaps
- Data mining techniques for the life sciences
- Statistical genomics. Methods and protocols
- scientific article; zbMATH DE number 7651154 (Why is no real title available?)
- A randomized numerical aligner (rNA)
- Indeterminate string factorizations and degenerate text transformations
- MIRA
- STAR
- bioperl
- BM-map
- GOstat
- GapsMis
- CloudBurst
- DIALIGN
- GATK
- ProbCons
- SOAP3
- Samtools
- VCFtools
- ANNOTATOR
- ADP_EM
- BLAT
- ANCHOR
- DBAli tools
- CUPSAT
- DUET
- ENCoM
- Brain
- ESpritz
- GenePattern
- ARAGORN
- HHblits
- APOLLO
- ANNIE
- LIGPLOT
- antiSMASH
- HTSeq
- CISA
- FUNC
- MAESTRO
- CCMpred
- CONFOLD
- NUCPLOT
- MeDor
- MetaDisorder
- HPOSim
- MOTIF-EM
- MFDp2
- IntelliGO
- dbCAN
- iPath
- OBSTRUCT
- dissectHMMER
- PDB_REDO
- OpenCyto
- MetaboLights
- PreDisorder
- MSEA
- PROFbval
- POODLE-I
- PrDOS
- SCOP2
- PredPPCrys
- HPMV
- Orione
- SFCHECK
- PhenomeNET
- RONN
- Mugsy
- MetaPSICOV
- BioMart
- NNcon
- PconsFold
- Prodigal
- SnpEff
- BEDTools
- FIMO
- featureCounts
- IGV
- SeqMap
- SHRiMP
- MUMMER
- MEDIPS
- SUPERFAMILY
- SPINE-D
- StrBioLib
- Meta-IDBA
- VaZyMolO
- VNTRseek
- XANNpred
- XtalPred
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