Samtools
From MaRDI portal
Cited in
(87)- FEXACT
- STAR
- A randomized numerical aligner (rNA)
- Exome sequencing identifies predisposing and fusion gene in ganglioneuroma, ganglioneuroblastoma and neuroblastoma
- Soap
- BM-map
- GOstat
- GATK
- An empirical Bayes testing procedure for detecting variants in analysis of next generation sequencing data
- SOPRA
- GRASS
- Scalable genomics with \texttt{R} and bioconductor
- VCFtools
- biovizBase
- HHblits
- BLAT
- FastQC
- Prodigal
- SnpEff
- FASTX
- Trimmomatic
- IGV
- MEDIPS
- BEDTools
- Meta-IDBA
- WebGestalt
- Data mining techniques for the life sciences
- Instance guaranteed ratio on greedy heuristic for genome scaffolding
- ReadDepth
- g Profiler
- chequeR
- MMDiff
- BFAST
- Full-text indexes for high-throughput sequencing
- De Novo NGS Data Compression
- Error correction in methylation profiling from NGS bisulfite protocols
- CUSHAW suite: parallel and efficient algorithms for NGS read alignment
- SCALCE
- NeoBio
- BESST
- PurBayes
- PurityEst
- PhyloWGS
- THetA
- PyClone
- VarScan
- HISAT
- BigWig
- mrsFAST
- SciClone
- Bambus 2
- Wileup
- ReQON
- SomaticSniper
- eSNV-detect
- Pline
- Electron
- LUMPY
- Delly
- Pindel
- GASSST
- Fiona
- MicroRazerS
- STELLAR
- BWA
- Textual data compression in computational biology: algorithmic techniques
- BamTools
- vipR
- MethylCoder
- RNACompress
- ProCKSI
- Bioinformatics. Volume I. Data, sequence analysis, and evolution
- DNACompress
- Analysis of expression profile and gene variation via development of methods for next generation sequencing data
- SomaticSignatures
- HitWalker
- Jannovar
- SNVer
- HTQC
- BCFtools
- ExomeWalker
- CDNA
- LRez
- Computational exome and genome analysis
- GenomicAlignments
- scientific article; zbMATH DE number 6724264 (Why is no real title available?)
- A Bayesian feature allocation model for tumor heterogeneity
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