SciClone
From MaRDI portal
Cited in
(29)- A Bayesian nonparametric model for inferring subclonal populations from structured DNA sequencing data
- Bioinformatics and phylogenetics. Seminal contributions of Bernard Moret
- TreeClone: reconstruction of tumor subclone phylogeny based on mutation pairs using next generation sequencing data
- Phylogeny-based tumor subclone identification using a Bayesian feature allocation model
- GATK
- Samtools
- Estimating Latent Cell Subpopulations with Bayesian Feature Allocation Models
- ReadDepth
- Mass concentration in a nonlocal model of clonal selection
- PurBayes
- PurityEst
- PhyloWGS
- THetA
- PyClone
- BitPhylogeny
- TreeClone
- PairClone
- BayClone2
- BWA
- SomaticSignatures
- HitWalker
- Jannovar
- SNVer
- HTQC
- BCFtools
- ExomeWalker
- Computational exome and genome analysis
- TEMULATOR
- Measuring evolutionary cancer dynamics from genome sequencing, one patient at a time
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