Measuring evolutionary cancer dynamics from genome sequencing, one patient at a time

DOI10.1515/SAGMB-2020-0075zbMATH Open1461.92071OpenAlexW3117492868MaRDI QIDQ830656FDOQ830656

Giulio Caravagna

Publication date: 7 May 2021

Published in: Statistical Applications in Genetics and Molecular Biology (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1515/sagmb-2020-0075

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zbMATH Keywords

clonal evolutionbulk genome sequencingsubclonal deconvolution

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Problems related to evolution (92D15) Protein sequences, DNA sequences (92D20) Pathology, pathophysiology (92C32)

Cites Work

• Pattern recognition and machine learning.
• Title not available (Why is that?)
• Evolutionary dynamics. Exploring the equations of life.
• Title not available (Why is that?)
• Line-of-descent and genealogical processes, and their applications in population genetics models
• Exact solution of a two-type branching process: clone size distribution in cell division kinetics
• Large population solution of the stochastic Luria–Delbrück evolution model
• Scaling solution in the large population limit of the general asymmetric stochastic Luria-Delbrück evolution process
• Conjunctive Bayesian networks

Cited In (1)

• Title not available (Why is that?)

Uses Software

• PhyloWGS
• PyClone
• SciClone
• GitHub
• TEMULATOR
• PRMLT

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