Dimension reduction for stochastic dynamical systems forced onto a manifold by large drift: a constructive approach with examples from theoretical biology

DOI10.1088/1751-8121/AA86C7MaRDI QIDQ4591273zbMATH OpenOpenAlexFDO

Authors Todd L. Parsons, Tim Rogers

Publication date 14 November 2017

Published in Journal of Physics A: Mathematical and Theoretical (Search for Journal in Brave)

Full work available at URL https://arxiv.org/abs/1510.07031

zbMATH Keywords

dimension reductiondynamical systemsstochastic processestimescale separation

Mathematics Subject Classification ID

Applications of stochastic analysis (to PDEs, etc.) (60H30) General biology and biomathematics (92B05)

Abstract: Systems composed of large numbers of interacting agents often admit an effective coarse-grained description in terms of a multidimensional stochastic dynamical system, driven by small-amplitude intrinsic noise. In applications to biological, ecological, chemical and social dynamics it is common for these models to posses quantities that are approximately conserved on short timescales, in which case system trajectories are observed to remain close to some lower-dimensional subspace. Here, we derive explicit and general formulae for a reduced-dimension description of such processes that is exact in the limit of small noise and well-separated slow and fast dynamics. The Michaelis-Menten law of enzyme-catalyzed reactions, and the link between the Lotka-Voltera and Wright-Fisher processes are explored as a simple worked examples. Extensions of the method are presented for infinite dimensional systems and processes coupled to non-Gaussian noise sources.

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Cites work

• scientific article; zbMATH DE number 3951715 (Why is no real title available?)
• scientific article; zbMATH DE number 3657493 (Why is no real title available?)
• scientific article; zbMATH DE number 3729228 (Why is no real title available?)
• scientific article; zbMATH DE number 2006037 (Why is no real title available?)
• scientific article; zbMATH DE number 3446103 (Why is no real title available?)
• scientific article; zbMATH DE number 3447884 (Why is no real title available?)
• scientific article; zbMATH DE number 781860 (Why is no real title available?)
• scientific article; zbMATH DE number 3274494 (Why is no real title available?)
• A note on superprocesses
• A stochastic version of center manifold theory
• Absorption and fixation times for neutral and quasi-neutral populations with density dependence
• Algorithm 432 [C2]: Solution of the matrix equation AX + XB = C [F4]
• An algorithmic introduction to numerical simulation of stochastic differential equations
• Classical quasi-steady state reduction -- a mathematical characterization
• Computing quasi-steady state reductions
• Degenerate diffusions arising from gene duplication models
• Degenerative convergence of diffusion process toward a submanifold by strong drift
• Determining ``small parameters for quasi-steady state
• Features of fast living: on the weak selection for longevity in degenerate birth-death processes
• Fixation in haploid populations exhibiting density dependence. II: The quasi-neutral case
• Limit theorems for sequences of jump Markov processes approximating ordinary differential processes
• Noise-Induced Phenomena in Slow-Fast Dynamical Systems
• Normal forms for stochastic differential equations
• On a model for interference between searching insect parasites
• Population genetics on islands connected by an arbitrary network: an analytic approach
• Reduced dynamics of stochastically perturbed gradient flows
• Solutions of a stochastic differential equation forced onto a manifold by a large drift
• Solutions of ordinary differential equations as limits of pure jump markov processes
• Stability, Instability and Chaos
• Stochastic dynamics on slow manifolds
• Stochastic pattern formation and spontaneous polarisation: the linear noise approximation and beyond
• Strong approximation theorems for density dependent Markov chains
• Sustained oscillations via coherence resonance in SIR

Cited in

(14)

• Phenomenological approach to reduced description of large-scale systems. I: Description of the approach
• Small noise and long time phase diffusion in stochastic limit cycle oscillators
• Demographic-noise-induced fixation in subdivided populations with migration
• Stochastic dynamics on slow manifolds
• Stochastic enzyme kinetics and the quasi-steady-state reductions: application of the slow scale linear noise approximation à la Fenichel
• Effective reduction of a three-dimensional circadian oscillator model
• Diffusion dynamics on the coexistence subspace in a stochastic evolutionary game
• Fixation in the stochastic Lotka-Volterra model with small fitness trade-offs
• Exploiting fast-variables to understand population dynamics and evolution
• Phase Reduction of Waves, Patterns, and Oscillations Subject to Spatially Extended Noise
• The isochronal phase of stochastic PDE and integral equations: metastability and other properties
• Exact dimensional reduction of linear dynamics: application to confined diffusion
• A hierarchical mean field model of interacting spins
• Disentangling eco-evolutionary effects on trait fixation

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