NetMix: a network-structured mixture model for reduced-bias estimation of altered subnetworks

DOI10.1007/978-3-030-45257-5_11zbMATH Open1500.92035OpenAlexW3019107540MaRDI QIDQ5040358FDOQ5040358

Authors: Matthew A. Reyna, Uthsav Chitra, Rebecca Elyanow, Benjamin J. Raphael 

Publication date: 14 October 2022

Published in: Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-030-45257-5_11

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zbMATH Keywords

cancermaximum likelihood estimationgene expressioninteraction networksnetwork anomaly

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Protein sequences, DNA sequences (92D20) Systems biology, networks (92C42) Computational methods for problems pertaining to biology (92-08)

Cites Work

• Title not available (Why is that?)
• Detection of an anomalous cluster in a network
• Distribution-free detection of structured anomalies: permutation and rank-based scans
• A spatial scan statistic
• On combinatorial testing problems
• Scan statistics
• Adaptive multiscale detection of filamentary structures in a background of uniform random points
• Searching for a trail of evidence in a maze
• The Behavior of the P-Value When the Alternative Hypothesis is True
• Consistency of the MLE under mixture models
• Detecting Anomalous Activity on Networks With the Graph Fourier Scan Statistic

Cited In (2)

• Sub-modular resolution analysis by network mixture models
• NetMix2: unifying network propagation and altered subnetworks

Uses Software

• Cytoscape
• PathBLAST
• HotNet
• NetMix2
• NetSig

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