Latent Network Estimation and Variable Selection for Compositional Data Via Variational EM
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Publication:5083364
DOI10.1080/10618600.2021.1935971OpenAlexW3167389373MaRDI QIDQ5083364FDOQ5083364
Authors: Nathan Osborne, Christine Peterson, Marina Vannucci 
Publication date: 22 June 2022
Published in: Journal of Computational and Graphical Statistics (Search for Journal in Brave)
Full work available at URL: https://arxiv.org/abs/2010.13229
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- scientific article; zbMATH DE number 1222294
- Graphical model selection with latent variables
count dataEM algorithmvariational inferencemicrobiome datagraphical modelBayesian hierarchical model
Cites Work
- A phylogenetic scan test on a Dirichlet-tree multinomial model for microbiome data
- EMVS: the EM approach to Bayesian variable selection
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- High-dimensional graphs and variable selection with the Lasso
- Sparse inverse covariance estimation with the graphical lasso
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- Model selection and estimation in the Gaussian graphical model
- Bayesian Variable Selection in Linear Regression
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- Scalable variational inference for Bayesian variable selection in regression, and its accuracy in genetic association studies
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- Bayesian graphical Lasso models and efficient posterior computation
- Scaling it up: stochastic search structure learning in graphical models
- Bayesian Variable Selection in Multinomial Probit Models to Identify Molecular Signatures of Disease Stage
- Hyper Inverse Wishart Distribution for Non-decomposable Graphs and its Application to Bayesian Inference for Gaussian Graphical Models
- Approximate Bayes factors and accounting for model uncertainty in generalised linear models
- A Bayesian graphical modeling approach to microRNA regulatory network inference
- Adjusted regularization in latent graphical models: application to multiple-neuron spike count data
- Using Bayesian latent Gaussian graphical models to infer symptom associations in verbal autopsies
Cited In (5)
- A Bayesian zero-inflated Dirichlet-multinomial regression model for multivariate compositional count data
- Rank-based correlation matrix estimation for high dimensional microbiome data
- Dynamic and robust Bayesian graphical models
- Rejoinder to the discussion of ``Bayesian graphical models for modern biological applications
- Phylogenetically informed Bayesian truncated copula graphical models for microbial association networks
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