Kermit: guided long read assembly using coloured overlap graphs

DOI10.4230/LIPICS.WABI.2018.11MaRDI QIDQ5090337zbMATH OpenOpenAlexFDO

Authors Riku Walve, Pasi Rastas, Leena Salmela

Publication date 18 July 2022

Full work available at URL http://dx.doi.org/10.4230/LIPIcs.WABI.2018.11

zbMATH Keywords

genome assemblycoloured overlap graphlinkage maps

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Computational methods for problems pertaining to biology (92-08)

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Cites work

• Disentangled long-read de Bruijn graphs via optical maps
• Rainbow connection in graphs

Cited in

(2)

• OMGS: optical map-based genome scaffolding
• Disentangled long-read de Bruijn graphs via optical maps

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