Topological data analysis and its usefulness for precision medicine studies

DOI10.2436/20.8080.02.120MaRDI QIDQ5093440zbMATH OpenOpenAlexFDO

Authors Raquel Iniesta, Ewan Carr, Mathieu Carrière, Naya Yerolemou, Bertrand Michel, Frédéric Chazal

Publication date 26 July 2022

Copyright license Creative Commons Attribution 4.0 International

Full work available at URL https://hal.inria.fr/hal-03912322

zbMATH Keywords

machine learningtopologyprecision medicinepersistence diagramtopological data analysispersistence landscapesmapperdata shape

Mathematics Subject Classification ID

Applications of statistics to biology and medical sciences; meta analysis (62P10) Statistical aspects of big data and data science (62R07) Topological data analysis (62R40)

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Cites work

• scientific article; zbMATH DE number 1179314 (Why is no real title available?)
• scientific article; zbMATH DE number 2103273 (Why is no real title available?)
• scientific article; zbMATH DE number 862499 (Why is no real title available?)
• scientific article; zbMATH DE number 7307480 (Why is no real title available?)
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• Computing persistent homology
• Homological algebra and data
• Local equivalence and intrinsic metrics between Reeb graphs
• Rates of convergence for robust geometric inference
• Scikit-learn: machine learning in Python
• Stability of persistence diagrams
• Statistical analysis and parameter selection for Mapper
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Cited in

(2)

• Topological Data Analysis for Genomics and Evolution
• A topological data analysis approach on predicting phenotypes from gene expression data

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