Integrating Petri nets and flux balance methods in computational biology models: a methodological and computational practice

DOI10.3233/FI-2020-1888MaRDI QIDQ5114232zbMATH OpenOpenAlexFDO

Authors Pernice Simone, Follia Laura, Balbo Gianfranco, Milanesi Luciano, Sartini Giulia, Totis Niccoló, Lió Pietro, Merelli Ivan, Cordero Francesca, Beccuti Marco

Publication date 21 June 2020

Published in Fundamenta Informaticae (Search for Journal in Brave)

Full work available at URL https://doi.org/10.3233/fi-2020-1888

zbMATH Keywords

computational biologyPetri nets and flux balance analysis

Mathematics Subject Classification ID

Systems biology, networks (92C42) Computational methods for problems pertaining to biology (92-08) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85)

Recommendations

• Modeling in systems biology. The Petri net approach. With a foreword of Jens Georg Reich.
• A Petri-net-based framework for biomodel engineering
• scientific article; zbMATH DE number 814403
• Petri net models for the semi-automatic construction of large scale biological networks
• Petri nets as a framework for the reconstruction and analysis of signal transduction pathways and regulatory networks

Cited in

(1)

• Prototype of integrated pseudo-dynamic crosstalk network for cancer molecular mechanism

This page was built for publication: Integrating Petri nets and flux balance methods in computational biology models: a methodological and computational practice

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5114232)