A reversible allelic partition process and Pitman sampling formula
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Publication:5114794
zbMATH Open1443.60034arXiv1905.05154MaRDI QIDQ5114794FDOQ5114794
Matteo Ruggiero, M. Giordano, Pierpaolo De Blasi
Publication date: 26 June 2020
Abstract: We introduce a continuous-time Markov chain describing dynamic allelic partitions which extends the branching process construction of the Pitman sampling formula in Pitman (2006) and the birth-and-death process with immigration studied in Karlin and McGregor (1967), in turn related to the celebrated Ewens sampling formula. A biological basis for the scheme is provided in terms of a population of individuals grouped into families, that evolves according to a sequence of births, deaths and immigrations. We investigate the asymptotic behaviour of the chain and show that, as opposed to the birth-and-death process with immigration, this construction maintains in the temporal limit the mutual dependence among the multiplicities. When the death rate exceeds the birth rate, the system is shown to have reversible distribution identified as a mixture of Pitman sampling formulae, with negative binomial mixing distribution on the population size. The population therefore converges to a stationary random configuration, characterised by a finite number of families and individuals.
Full work available at URL: https://arxiv.org/abs/1905.05154
Markov chains (discrete-time Markov processes on discrete state spaces) (60J10) Population dynamics (general) (92D25) Stationary stochastic processes (60G10) Branching processes (Galton-Watson, birth-and-death, etc.) (60J80)
Cites Work
- Mixtures of Dirichlet processes with applications to Bayesian nonparametric problems
- The two-parameter Poisson-Dirichlet distribution derived from a stable subordinator
- Exchangeable and partially exchangeable random partitions
- Combinatorial stochastic processes. Ecole d'Eté de Probabilités de Saint-Flour XXXII -- 2002.
- Title not available (Why is that?)
- A species sampling model with finitely many types
- Size-biased sampling of Poisson point processes and excursions
- Ferguson distributions via Polya urn schemes
- Distributions of linear functionals of two parameter Poisson-Dirichlet random measures
- Title not available (Why is that?)
- Markov Chains
- The ubiquitous Ewens sampling formula
- The sampling theory of selectively neutral alleles
- Addendum to a paper of W. Ewens
- Pólya-like urns and the Ewens' sampling formula
- Contributions to the theory of Dirichlet processes
- Embedding of Urn Schemes into Continuous Time Markov Branching Processes and Related Limit Theorems
- Title not available (Why is that?)
- École d'été de probabilités de Saint-Flour XIII - 1983
- Poisson process approximations for the Ewens sampling formula
- The Poisson-Dirichlet Distribution and Related Topics
- Random discrete distributions invariant under size-biased permutation
- Order statistics for jumps of normalised subordinators
- The birth process with immigration, and the genealogical structure of large populations
- Partition structures derived from Brownian motion and stable subordinators
- Title not available (Why is that?)
- Regenerative partition structures
- Large deviation principles for some random combinatorial structures in population genetics and Brownian motion
- Title not available (Why is that?)
Cited In (2)
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