Accurate Particle-Based Reaction Algorithms for Fixed Timestep Simulators

DOI10.1007/978-3-030-38230-8_11zbMath1441.92003OpenAlexW3016095197MaRDI QIDQ5118794

Steven S. Andrews, Karen Lipkow, Samuel A. Isaacson, Ash Khan, Casper H. L. Beentjes, Stuart T. Johnston, Satya N. V. Arjunan, Adrien Coulier, Christopher Angstmann

Publication date: 27 August 2020

Published in: 2018 MATRIX Annals (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1007/978-3-030-38230-8_11

Mathematics Subject Classification ID

Reaction-diffusion equations (35K57) Classical flows, reactions, etc. in chemistry (92E20) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Biochemistry, molecular biology (92C40) Mathematical modeling or simulation for problems pertaining to biology (92-10)

Uses Software

• Smoldyn

Cites Work

• Unnamed Item
• A comparison of bimolecular reaction models for stochastic reaction-diffusion systems
• Stochastic approaches for modelling in vivo reactions
• Cell Polarity: Quantitative Modeling as a Tool in Cell Biology
• Fast Monte Carlo Simulation Methods for Biological Reaction-Diffusion Systems in Solution and on Surfaces
• From molecular dynamics to Brownian dynamics

This page was built for publication: Accurate Particle-Based Reaction Algorithms for Fixed Timestep Simulators