Predicting population extinction in lattice-based birth–death–movement models
From MaRDI portal
Publication:5160983
Abstract: The question of whether a population will persist or go extinct is of key interest throughout ecology and biology. Various mathematical techniques allow us to generate knowledge regarding individual behaviour, which can be analysed to obtain predictions about the ultimate survival or extinction of the population. A common model employed to describe population dynamics is the lattice-based random walk model with crowding (exclusion). This model can incorporate behaviour such as birth, death and movement, while including natural phenomena such as finite size effects. Performing sufficiently many realisations of the random walk model to extract representative population behaviour is computationally intensive. Therefore, continuum approximations of random walk models are routinely employed. However, standard continuum approximations are notoriously incapable of making accurate predictions about population extinction. Here, we develop a new continuum approximation, the state space diffusion approximation, which explicitly accounts for population extinction. Predictions from our approximation faithfully capture the behaviour in the random walk model, and provides additional information compared to standard approximations. We examine the influence of the number of lattice sites and initial number of individuals on the long-term population behaviour, and demonstrate the reduction in computation time between the random walk model and our approximation.
Recommendations
- scientific article; zbMATH DE number 4047488
- Predicting population extinction from early observations of the Lotka-Volterra system
- Allee effects and extinction in a lattice model
- Predicting the extinction vulnerability of species: stochastic approach to deterministic population dynamic models
- scientific article; zbMATH DE number 4055437
- Population extinction and quasi-stationary behavior in stochastic density-dependent structured models
- Extinction-time for stochastic population models
- Evaluating the Expected Time to Population Extinction with Semi-Stochastic Models
- Exit probabilities for stochastic population models: Initial tendencies for extinction, explosion, or permanence
- Persistence and extinction in a stochastic nonautonomous logistic model of population dynamics
Cites work
- A chemotactic model for the advance and retreat of the primitive streak in avian development
- A comparison and catalog of intrinsic tumor growth models
- Bridging the gap between individual-based and continuum models of growing cell populations
- Computing diffusivities from particle models out of equilibrium
- Coupled dynamics of populations supported by discrete sites and their continuum limit
- Deterministic epidemiological models at the individual level
- Extinction Times for Birth-Death Processes: Exact Results, Continuum Asymptotics, and the Failure of the Fokker--Planck Approximation
- Extinction and wavefront propagation in a reaction-diffusion model of a structured population with distributed maturation delay
- Extinction times in the subcritical stochastic SIS logistic epidemic
- From a discrete model of chemotaxis with volume-filling to a generalized Patlak-Keller-Segel model
- From discrete to continuous evolution models: a unifying approach to drift-diffusion and replicator dynamics
- Hybrid Markov chain models of S-I-R disease dynamics
- Mathematical biology. Vol. 2: Spatial models and biomedical applications.
- Modelling the movement of interacting cell populations: a moment dynamics approach
- Numerical recipes. The art of scientific computing.
- On the effects of spatial heterogeneity on the persistence of interacting species
- Revisiting the Fisher-Kolmogorov-Petrovsky-Piskunov equation to interpret the spreading-extinction dichotomy
- The Diffusion Limit of Transport Equations Derived from Velocity-Jump Processes
- The MATLAB ODE Suite
- The SIR epidemic model from a PDE point of view
- The quasistationary distribution of the stochastic logistic model
- Unpacking the Allee effect: determining individual-level mechanisms that drive global population dynamics
Cited in
(4)
This page was built for publication: Predicting population extinction in lattice-based birth–death–movement models
Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5160983)