Colouring space -- a coloured framework for spatial modelling in systems biology

DOI10.1007/978-3-642-38697-8_13MaRDI QIDQ5300874zbMATH OpenOpenAlexWikidataFDO

Authors

Publication date 28 June 2013

Published in Application and Theory of Petri Nets and Concurrency (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-642-38697-8_13

zbMATH Keywords

stochasticsystems biologycoloured Petri netscontinuoushybrid Petri netsqualitativespatial modellingbiomolecular networksbiomodel engineering

Mathematics Subject Classification ID

Systems biology, networks (92C42) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85)

Recommendations

• A Petri-net-based framework for biomodel engineering
• Design Issues for Qualitative Modelling of Biological Cells with Petri Nets
• Modeling membrane systems using colored stochastic Petri nets
• scientific article; zbMATH DE number 4028914
• scientific article; zbMATH DE number 1540512

Cited in

(6)

• Chromar, a rule-based language of parameterised objects
• Chromar, a language of parameterised agents
• Efficient modelling of yeast cell cycles based on multisite phosphorylation using coloured hybrid Petri nets with marking-dependent arc weights
• A generalized neighborhood for cellular automata
• Modeling biological gradient formation: combining partial differential equations and Petri nets
• Petri-net-based 2D design of DNA walker circuits

This page was built for publication: Colouring space -- a coloured framework for spatial modelling in systems biology

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5300874)