Relating PDEs in Cylindrical Coordinates and CTMCs with Levels of Concentration

DOI10.1016/J.ENTCS.2010.12.005zbMATH Open1283.68238DBLPjournals/entcs/DegasperiC10aOpenAlexW2149547790WikidataQ59675345 ScholiaQ59675345MaRDI QIDQ5404086FDOQ5404086

A. Degasperi, M. Calder

Publication date: 21 March 2014

Published in: Electronic Notes in Theoretical Computer Science (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.entcs.2010.12.005

zbMATH Keywords

ordinary differential equationspartial differential equationsreaction-diffusion equationscontinuous time Markov chainscylindrical coordinatesgeometrical space

Mathematics Subject Classification ID

Biochemistry, molecular biology (92C40) Models and methods for concurrent and distributed computing (process algebras, bisimulation, transition nets, etc.) (68Q85)

Cites Work

• Title not available (Why is that?)
• Bio-PEPA: A framework for the modelling and analysis of biological systems
• Computational Methods in Systems Biology
• Rule-Based Modelling of Cellular Signalling
• A process algebra framework for multi-scale modelling of biological systems
• Some Investigations Concerning the CTMC and the ODE Model Derived From Bio-PEPA
• Modelling Biological Compartments in Bio-PEPA

Cited In (2)

• Asymptotic behaviour of a conservative reaction-diffusion system associated with a Markovian process algebra model
• Fundamental results on the reactionâdiffusion equations associated with a PEPA model

Uses Software

• PRISM
• Bio-PEPA
• FlexPDE
• BioNetGen
• BIOCHAM
• PEPA
• COPASI
• LBS

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