Exploring the performance of spatial stochastic simulation algorithms
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Publication:543671
DOI10.1016/j.jcp.2010.12.030zbMath1316.65012OpenAlexW1973016141MaRDI QIDQ543671
Roland Ewald, Matthias Jeschke, Adelinde M. Uhrmacher
Publication date: 17 June 2011
Published in: Journal of Computational Physics (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jcp.2010.12.030
performance evaluationperformance analysisstochastic simulationSSA\(\tau \)-leapingGillespie multi-particle methodnext sub-volume methodspatial \(\tau \)-leaping
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Cites Work
- Temporal acceleration of spatially distributed kinetic Monte Carlo simulations
- Accuracy limitations and the measurement of errors in the stochastic simulation of chemically reacting systems
- An adaptive algorithm for simulation of stochastic reaction-diffusion processes
- Karl Pearson and the Chi-Squared Test
- Needed: An Empirical Science of Algorithms
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