Inference of Population Structure from Ancient DNA

DOI10.1007/978-3-319-89929-9_6MaRDI QIDQ5881344zbMATH OpenOpenAlexFDO

Authors Itsik Pe'er

Publication date 9 March 2023

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/978-3-319-89929-9_6

zbMATH Keywords

population geneticsvariational inferenceKalman filteringpopulation structureancient DNAtime-series

Mathematics Subject Classification ID

Genetics and epigenetics (92D10) Protein sequences, DNA sequences (92D20) Software, source code, etc. for problems pertaining to biology (92-04)

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Cites work

• scientific article; zbMATH DE number 6377992 (Why is no real title available?)
• 10.1162/jmlr.2003.3.4-5.993
• An introduction to variational methods for graphical models
• Graphical models, exponential families, and variational inference

Cited in

(3)

• Bias in estimators of archaic admixture
• Deep learning for inferring distribution of time to the last common ancestor from a diploid genome
• scientific article; zbMATH DE number 5262910 (Why is no real title available?)

Describes a project that uses

Uses Software

• fastSTRUCTURE
• STRUCTURE
• PLINK

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