STRUCTURE

MaRDI QIDQ25586swMATHFDO

Official website https://web.stanford.edu/group/pritchardlab/structure.html

Cited in

(only showing first 100 items - show all)

• Interacting sequential Monte Carlo samplers for trans-dimensional simulation
• Eigenanalysis of SNP data with an identity by descent interpretation
• CluStrat
• TeraPCA
• Genomic control, a new approach to genetic-based association studies.
• Some applications of genetics in statistical ecology
• On the use of bootstrap with variational inference: theory, interpretation, and a two-sample test example
• Nonparametric Bayesian negative binomial factor analysis
• A general method for robust Bayesian modeling
• Fast inference of individual admixture coefficients using geographic data
• Precision assessment of some supervised and unsupervised algorithms for genotype discrimination in the genus \textit{pisum} using SSR molecular data
• PLINK
• Population structure and coalescence in pedigrees: comparisons to the structured coalescent and a framework for inference
• Analysis of phenotypic- and estimated breeding values (EBV) to dissect the genetic architecture of complex traits in a Scots pine three-generation pedigree design
• Modeling population structure under hierarchical Dirichlet processes
• Contiguity and non-reconstruction results for planted partition models: the dense case
• Separating populations with wide data: a spectral analysis
• SPAGEDi
• GenAlEx
• MixMoGenD
• Acceptable set topic modeling
• Bayesian bi-clustering methods with applications in computational biology
• Factor and hybrid components for model-based clustering
• CLUMPP
• Bayesian learning via neural Schrödinger-Föllmer flows
• Is infinity that far? A Bayesian nonparametric perspective of finite mixture models
• GENECLASS2
• Chimeral clustering
• A fast, provably accurate approximation algorithm for sparse principal component analysis reveals human genetic variation across the world
• Optimal rates for community estimation in the weighted stochastic block model
• Hidden Markov random fields and the genetic structure of the Scandinavian brown bear population
• Issues of stability and uniqueness of stochastic matrix factorization
• On the heterozygosity of an admixed population
• PBAT
• Identifying QTLs and epistasis in structured plant populations using adaptive mixed LASSO
• Mathematical properties of \(F_{\mathrm{st}}\) between admixed populations and their parental source populations
• The cumulative effect of genetic markers on classification performance: insights from simple models
• Reliable clustering of Bernoulli mixture models
• Geneland
• Posterior contraction of the population polytope in finite admixture models
• The genetical bandwidth mapping: a spatial and graphical representation of population genetic structure based on the Wombling method
• Haploview
• Random partition models and exchangeability for Bayesian identification of population struc\-ture
• Toward the human genotope
• An algorithm for deciding the number of clusters and validation using simulated data with application to exploring crop population structure
• Variable selection in model-based clustering using multilocus genotype data
• Describing disability through individual-level mixture models for multivariate binary data
• MISA
• PSMIX
• ADMIXMAP
• Delve Datasets
• Demographic inference using genetic data from a single individual: separating population size variation from population structure
• Discriminative Bayesian filtering lends momentum to the stochastic Newton method for minimizing log-convex functions
• textmineR
• AABC
• BAMD
• A spatial Dirichlet process mixture model for clustering population genetics data
• Using genetic data to estimate diffusion rates in heterogeneous landscapes
• Association tests for a censored quantitative trait and candidate genes in structured populations with multilevel genetic relatedness
• Fast moment estimation for generalized latent Dirichlet models
• UNPHASED
• LaplaceAndzTransform
• Modelling evolution in a spatial continuum
• Beyond Prediction: A Framework for Inference With Variational Approximations in Mixture Models
• Augmentation schemes for particle MCMC
• Exploiting syntactic, semantic, and lexical regularities in language modeling via directed Markov random fields
• RelateAdmix
• Clustering and variable selection for categorical multivariate data
• tess3r
• ANGSD
• fastSTRUCTURE
• LEA
• AmiGO
• admixture
• In-Close
• Simultaneous SNP identification in association studies with missing data
• GemTools
• Eigenstrat
• Frappe
• HapMix
• SABER
• ANCESTRYMAP
• LAMP
• FastMotif
• Mixture models with a prior on the number of components
• Separation of the largest eigenvalues in eigenanalysis of genotype data from discrete subpopulations
• A novel Bayesian semiparametric algorithm for inferring population structure and adjusting for case-control association tests
• Reconstruction and estimation in the planted partition model
• Bayesian modeling for genetic association in case-control studies: accounting for unknown population substructure
• Algorithmic improvements to species delimitation and phylogeny estimation under the multispecies coalescent
• Learning Subspaces of Different Dimensions
• Standard statistical tools for the breed allocation problem
• BAPS 2
• eBURST
• GLFM
• scientific article; zbMATH DE number 7415088 (Why is no real title available?)
• SimWalk2
• HS_GHS
• Inference of Population Structure from Ancient DNA
• AABC: approximate approximate Bayesian computation for inference in population-genetic models

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