STRUCTURE

swMATH13672MaRDI QIDQ25586FDOQ25586

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Official website: https://web.stanford.edu/group/pritchardlab/structure.html

Cited In (only showing first 100 items - show all)

• Describing disability through individual-level mixture models for multivariate binary data
• Contiguity and non-reconstruction results for planted partition models: the dense case
• Hierarchical relational models for document networks
• Modelling evolution in a spatial continuum
• Augmentation schemes for particle MCMC
• On the use of bootstrap with variational inference: theory, interpretation, and a two-sample test example
• A state-space mixed membership blockmodel for dynamic network tomography
• A general method for robust Bayesian modeling
• A vectorized method of importance sampling with applications to models of mutation and migration
• Mixture models with a prior on the number of components
• Random partition models and exchangeability for Bayesian identification of population struc\-ture
• Population structure and cryptic relatedness in genetic association studies
• Excess false positive rate caused by population stratification and disease rate heterogeneity in case-control association studies
• The cumulative effect of genetic markers on classification performance: insights from simple models
• Variable selection in model-based clustering using multilocus genotype data
• Some applications of genetics in statistical ecology
• A spatial Dirichlet process mixture model for clustering population genetics data
• Simultaneous SNP identification in association studies with missing data
• Using genetic data to estimate diffusion rates in heterogeneous landscapes
• Separating populations with wide data: a spectral analysis
• Identifying QTLs and epistasis in structured plant populations using adaptive mixed LASSO
• An approximate likelihood for genetic data under a model with recombination and population splitting
• Bayesian analysis of population structure based on linked molecular information
• Estimating genealogies from unlinked marker data: a Bayesian approach
• PLINK
• SPAGEDi
• GenAlEx
• MixMoGenD
• CLUMPP
• GENECLASS2
• MISA
• PBAT
• Geneland
• Haploview
• ADMIXMAP
• Delve Datasets
• PSMIX
• Polynomial time approximate or perfect samplers for discretized Dirichlet distribution
• textmineR
• AABC
• BAMD
• Bayesian modeling for genetic association in case-control studies: accounting for unknown population substructure
• Toward the human genotope
• The role of family-based designs in genome-wide association studies
• LaplaceAndzTransform
• UNPHASED
• RelateAdmix
• ANGSD
• fastSTRUCTURE
• LEA
• AmiGO
• tess3r
• admixture
• LAMP
• In-Close
• ANCESTRYMAP
• Eigenstrat
• Frappe
• GemTools
• HapMix
• SABER
• FastMotif
• Genomic control, a new approach to genetic-based association studies.
• BAPS 2
• eBURST
• GLFM
• SimWalk2
• HS_GHS
• Posterior contraction of the population polytope in finite admixture models
• Variable selection for mixed data clustering: application in human population genomics
• AABC: approximate approximate Bayesian computation for inference in population-genetic models
• Interacting multiple try algorithms with different proposal distributions
• Reconstruction and estimation in the planted partition model
• Algorithmic improvements to species delimitation and phylogeny estimation under the multispecies coalescent
• Interacting sequential Monte Carlo samplers for trans-dimensional simulation
• Learning genetic population structures using minimization of stochastic complexity
• Eigenanalysis of SNP data with an identity by descent interpretation
• Clustering and variable selection for categorical multivariate data
• GWAS Catalog
• Separation of the largest eigenvalues in eigenanalysis of genotype data from discrete subpopulations
• Fast inference of individual admixture coefficients using geographic data
• A mixture of experts model for rank data with applications in election studies
• New perspectives on multilocus ancestry informativeness
• Modeling population structure under hierarchical Dirichlet processes
• Population structure and coalescence in pedigrees: comparisons to the structured coalescent and a framework for inference
• ThreSPCA
• Is infinity that far? A Bayesian nonparametric perspective of finite mixture models
• Complexity control in a mixture model by the Hardy-Weinberg equilibrium
• The use of plasmodes as a supplement to simulations: a simple example evaluating individual admixture estimation methodologies
• On the heterozygosity of an admixed population
• Optimal rates for community estimation in the weighted stochastic block model
• An algorithm for deciding the number of clusters and validation using simulated data with application to exploring crop population structure
• Mathematical properties of \(F_{\mathrm{st}}\) between admixed populations and their parental source populations
• Beyond Prediction: A Framework for Inference With Variational Approximations in Mixture Models
• A spectral graph approach to discovering genetic ancestry
• Fast moment estimation for generalized latent Dirichlet models
• Nonparametric Bayesian negative binomial factor analysis
• SpaceMix
• Chimeral clustering
• Standard statistical tools for the breed allocation problem

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