Eigenstrat
From MaRDI portal
Cited in
(only showing first 100 items - show all)- Eigenanalysis of SNP data with an identity by descent interpretation
- Asymptotic properties of principal component analysis and shrinkage-bias adjustment under the generalized spiked population model
- ACAT
- ScreeNOT
- CluStrat
- TeraPCA
- DDL
- Naturalgwas
- lfmm
- Bayesian variable selection regression for genome-wide association studies and other large-scale problems
- PcGets
- Nonparametric variable selection and classification: the CATCH algorithm
- Effective sample size: quick estimation of the effect of related samples in genetic case-control association analyses
- Powerful test based on conditional effects for genome-wide screening
- Principal components adjusted variable screening
- PLINK
- Sparse probit linear mixed model
- Multiple hypothesis testing adjusted for latent variables, with an application to the AGEMAP gene expression data
- Separating populations with wide data: a spectral analysis
- GenAlEx
- Adjusting for spatial effects in genomic prediction
- CLUMPP
- An impossibility result for phylogeny reconstruction from \(k\)-mer counts
- Doubly debiased Lasso: high-dimensional inference under hidden confounding
- Sparse latent factor regression models for genome-wide and epigenome-wide association studies
- A fast, provably accurate approximation algorithm for sparse principal component analysis reveals human genetic variation across the world
- A comparison of principal component methods between multiple phenotype regression and multiple SNP regression in genetic association studies
- Penalized partial least square applied to structured data
- SDMTools
- Imputation and low-rank estimation with missing not at random data
- Simple and reliable estimators of coefficients of interest in a model with high-dimensional confounding effects
- Identifying QTLs and epistasis in structured plant populations using adaptive mixed LASSO
- ProbABEL
- Certifiably optimal sparse principal component analysis
- Reliable clustering of Bernoulli mixture models
- FAMT
- leapp
- A practical approach to adjusting for population stratification in genome-wide association studies: principal components and propensity scores (PCAPS)
- A knockoff filter for high-dimensional selective inference
- ROP: matrix recovery via rank-one projections
- Robust computation of linear models by convex relaxation
- Comparing the performance of linear and nonlinear principal components in the context of high-dimensional genomic data integration
- A statistical test for detecting parent-of-origin effects when parental information is missing
- Recursive transformed component statistical analysis for incipient fault detection
- Toward the human genotope
- Asymptotic powers for matched trend tests and robust matched trend tests in case-control genetic association studies
- pedigreem
- aplpack
- PSMIX
- ADMIXMAP
- STRUCTURE
- rrBLUP
- IMPUTE
- Flexible modelling of genetic effects on function-valued traits
- GWAsimulator
- genMOSS
- pi-MASS
- MaCH
- HAPGEN2
- denoiseR
- PennCNV
- A Bayesian graphical model for genome-wide association studies (GWAS)
- Combining dependent F-tests for robust association of quantitative traits under genetic model uncertainty
- EigenPrism
- A Modified Random Survival Forests Algorithm for High Dimensional Predictors and Self-Reported Outcomes
- Augmentation schemes for particle MCMC
- qvalue
- GCTA
- FFBSKAT
- RelateAdmix
- GEMMA
- FTEC
- Rassoc
- hapassoc
- admixture
- ePCA
- METAL
- Leveraging local identity-by-descent increases the power of case/control GWAS with related individuals
- MPAT
- BUScorrect
- FMS
- MaXact
- DREBIN
- GemTools
- Frappe
- HapMix
- SABER
- ANCESTRYMAP
- LAMP
- Dual principal component pursuit
- PySyft
- Robust PCA by manifold optimization
- selective-inference
- Qxpak
- ccSVM
- pedigreemm
- PedGenie
- \(p\)-value calibration for multiple testing problems in genomics
- Robust methods to detect disease-genotype association in genetic association studies: calculate \(p\)-values using exact conditional enumeration instead of simulated permutations or asymptotic approximations
- Descartes' rule of signs and the identifiability of population demographic models from genomic variation data
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