Clustering of temporal gene expression data by regularized spline regression and an energy based similarity measure

DOI10.1016/J.PATCOG.2010.07.011zbMATH Open1207.68333OpenAlexW2022766999MaRDI QIDQ609108FDOQ609108

Authors: Weifeng Zhang, Chao-Chun Liu, Hong Yan 

Publication date: 30 November 2010

Published in: Pattern Recognition (Search for Journal in Brave)

Full work available at URL: https://doi.org/10.1016/j.patcog.2010.07.011

Recommendations

• A cluster algorithm for time-course gene expression profile based on affinity propagation
• Clustering longitudinal profiles using P-splines and mixed effects models applied to time-course gene expression data
• A novel pattern based clustering methodology for time-series microarray data
• Gene expression data clustering method based on stable sparse principal component
• A novel HMM-based clustering algorithm for the analysis of gene expression time-course data

zbMATH Keywords

clusteringgene expression dataregularized regressionenergy operatorspline model

Mathematics Subject Classification ID

Pattern recognition, speech recognition (68T10) Protein sequences, DNA sequences (92D20)

Cites Work

• Title not available (Why is that?)
• Title not available (Why is that?)
• Clustering of time series data -- a survey
• A survey of kernel and spectral methods for clustering
• Towards improving fuzzy clustering using support vector machine: application to gene expression data
• Clustering of time-course gene expression data using functional data analysis
• Clustering of unevenly sampled gene expression time-series data
• An energy-based similarity measure for time series

Cited In (9)

• Gene expression data clustering method based on stable sparse principal component
• Clustering longitudinal profiles using P-splines and mixed effects models applied to time-course gene expression data
• A cluster algorithm for time-course gene expression profile based on affinity propagation
• A multi-purpose time series data standardization method
• Title not available (Why is that?)
• A new Dirichlet process for mining dynamic patterns in functional data
• Clustering time series gene expression data based on sum-of-exponentials fitting
• A novel pattern based clustering methodology for time-series microarray data
• A Poisson-based adaptive affinity propagation clustering for SAGE data

Uses Software

• impute

This page was built for publication: Clustering of temporal gene expression data by regularized spline regression and an energy based similarity measure

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q609108)