Spaces of phylogenetic diversity indices: combinatorial and geometric properties

DOI10.1007/S11538-023-01183-YMaRDI QIDQ6168046zbMATH OpenOpenAlexFDO

Authors Kerry Manson, Mike Steel

Publication date 8 August 2023

Published in Bulletin of Mathematical Biology (Search for Journal in Brave)

Copyright license Creative Commons Attribution 4.0 International

Full work available at URL https://doi.org/10.1007/s11538-023-01183-y

zbMATH Keywords

phylogenetic treephylogenetic diversityconvex spacefair proportion indexdiversity indexequal-splits index

Mathematics Subject Classification ID

Problems related to evolution (92D15)

Recommendations

• Combinatorial properties of phylogenetic diversity indices
• The equivalence of two phylogenetic biodiversity measures: the Shapley value and fair proportion index
• Phylogenetic diversity and biodiversity indices on phylogenetic networks
• Effects of discordance between species and gene trees on phylogenetic diversity conservation
• Biodiversity, Shapley value and phylogenetic trees: some remarks

Cites work

• Combinatorial properties of phylogenetic diversity indices
• Equality of Shapley value and fair proportion index in phylogenetic trees
• Phylogeny. Discrete and random processes in evolution
• The Shapley value of phylogenetic trees
• The equivalence of two phylogenetic biodiversity measures: the Shapley value and fair proportion index

Cited in

(11)

• Biodiversity, Shapley value and phylogenetic trees: some remarks
• The robustness of phylogenetic diversity indices to extinctions
• Effects of discordance between species and gene trees on phylogenetic diversity conservation
• On the Shapley value of unrooted phylogenetic trees
• Evolutionarily distinctive species often capture more phylogenetic diversity than expected
• Phylogenetic diversity indices from an affine and projective viewpoint
• The combinatorics of hidden diversity
• The link between segregation and phylogenetic diversity
• A genome evolution-based framework for measures of originality for clades
• Phylogenetic diversity and biodiversity indices on phylogenetic networks
• Quantifying the difference between phylogenetic diversity and diversity indices

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