Identifiability and inference of phylogenetic birth-death models

DOI10.1016/J.JTBI.2023.111520MaRDI QIDQ6174237zbMATH OpenOpenAlexFDO

Authors Brandon Legried, Jonathan Terhorst

Publication date 14 July 2023

Published in Journal of Theoretical Biology (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.jtbi.2023.111520

zbMATH Keywords

identifiabilityphylogeneticsbirth-death modelphylodynamics

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of branching processes (60J85)

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Cites work

• Can one hear the shape of a population history?
• Identifiability and inference of non-parametric rates-across-sites models on large-scale phylo\-genies
• Identifiability of large phylogenetic mixture models
• On incomplete sampling under birth-death models and connections to the sampling-based coalescent
• On the Generalized "Birth-and-Death" Process
• Rates of convergence in the two-island and isolation-with-migration models
• Sampling-through-time in birth-death trees
• The conditioned reconstructed process

Cited in

(2)

• Coalescent models derived from birth-death processes
• A diffusion-based approach for simulating forward-in-time state-dependent speciation and extinction dynamics

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