The effect of recurrent mutation on the linkage disequilibrium under a selective sweep

DOI10.1007/s00285-011-0411-yzbMath1284.92071arXiv1009.3150OpenAlexW2064117625WikidataQ51598143 ScholiaQ51598143MaRDI QIDQ662597

Cornelia Pokalyuk

Publication date: 24 February 2012

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1009.3150

zbMATH Keywords

genealogyhaplotype structurestar-like approximationstrong positive selection

Mathematics Subject Classification ID

Problems related to evolution (92D15) Applications of branching processes (60J85) Applications of continuous-time Markov processes on discrete state spaces (60J28)

Related Items

The effect of recurrent mutations on genetic diversity in a large population of varying size

Uses Software

• MSMS

Cites Work

• Approximating selective sweeps
• Analytic computation of the expectation of the linkage disequilibrium coefficient \(r^2\)
• An approximate sampling formula under genetic hitchhiking
• The pattern of genetic hitchhiking under recurrent mutation
• Coalescence in a random background.
• Approximating genealogies for partially linked neutral loci under a selective sweep
• Limit theorems for sequences of jump Markov processes approximating ordinary differential processes