Combinatorics of RNA-RNA interaction

DOI10.1007/s00285-011-0423-7zbMath1284.05025arXiv1006.2924OpenAlexW2963162652WikidataQ51572477 ScholiaQ51572477MaRDI QIDQ662619

Christian M. Reidys, Thomas J. X. Li

Publication date: 24 February 2012

Published in: Journal of Mathematical Biology (Search for Journal in Brave)

Full work available at URL: https://arxiv.org/abs/1006.2924

zbMATH Keywords

shapesingularity analysisjoint structuresymbolic enumerationRNA-RNA interaction

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20) Asymptotic enumeration (05A16) Molecular structure (graph-theoretic methods, methods of differential topology, etc.) (92E10)

Related Items

Combinatorics of locally optimal RNA secondary structures ⋮ Combinatorial analysis of interacting RNA molecules ⋮ Asymptotic number of hairpins of saturated RNA secondary structures ⋮ A bijection for tricellular maps

Cites Work

• Unnamed Item
• Modular, \(k\)-noncrossing diagrams
• Combinatorial design of pseudoknot RNA
• RNA secondary structure: a complete mathematical analysis
• Linear trees and RNA secondary structure
• Algebraic Dynamic Programming
• Research in Computational Molecular Biology
• AN EXAMPLE IN THE THEORY OF THE SPECTRUM OF A FUNCTION