Peeling phylogenetic `oranges'

DOI10.1016/j.aam.2004.03.003zbMath1067.92045OpenAlexW2027997634MaRDI QIDQ705231

Vincent L. Moulton, Mike A. Steel

Publication date: 26 January 2005

Published in: Advances in Applied Mathematics (Search for Journal in Brave)

Full work available at URL: http://hdl.handle.net/10092/12529

zbMATH Keywords

PartitionsTreesPosetContractibilityForests

Mathematics Subject Classification ID

Trees (05C05) Problems related to evolution (92D15) Applications of graph theory (05C90) Combinatorics of partially ordered sets (06A07) Topological spaces with richer structures (54E99)

Related Items (12)

Tropical optimal transport and Wasserstein distances ⋮ Information geometry for phylogenetic trees ⋮ Consistency and convergence rate of phylogenetic inference via regularization ⋮ Tree cumulants and the geometry of binary tree models ⋮ Toric cubes ⋮ Classifying tree topology changes along tropical line segments ⋮ A regular decomposition of the edge-product space of phylogenetic trees ⋮ Shellability of face posets of electrical networks and the CW poset property ⋮ A smeary central limit theorem for manifolds with application to high-dimensional spheres ⋮ The edge-product space of phylogenetic trees is not shellable ⋮ Brownian motion tree models are toric ⋮ Wald space for phylogenetic trees

Cites Work

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• The complexity of reconstructing trees from qualitative characters and subtrees
• Shellability of complexes of trees
• Retractions of finite distance functions onto tree metrics
• Geometry of the space of phylogenetic trees
• Complexes of directed trees

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