R3P-Loc: a compact multi-label predictor using ridge regression and random projection for protein subcellular localization
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Publication:739656
DOI10.1016/j.jtbi.2014.06.031zbMath1343.92177WikidataQ38475141 ScholiaQ38475141MaRDI QIDQ739656
Sun-Yuan Kung, Man-Wai Mak, Shibiao Wan
Publication date: 19 August 2016
Published in: Journal of Theoretical Biology (Search for Journal in Brave)
Full work available at URL: https://doi.org/10.1016/j.jtbi.2014.06.031
92B10: Taxonomy, cladistics, statistics in mathematical biology
92C40: Biochemistry, molecular biology
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Jointly evolving and compressing fuzzy system for feature reduction and classification, R3P-Loc, mLASSO-Hum: a LASSO-based interpretable human-protein subcellular localization predictor, Efficient extreme learning machine via very sparse random projection
Uses Software
Cites Work
- Predicting plant protein subcellular multi-localization by Chou's PseAAC formulation based multi-label homolog knowledge transfer learning
- On label dependence and loss minimization in multi-label classification
- The Johnson-Lindenstrauss lemma and the sphericity of some graphs
- Database-friendly random projections: Johnson-Lindenstrauss with binary coins.
- A novel feature representation method based on Chou's pseudo amino acid composition for protein structural class prediction
- Some remarks on protein attribute prediction and pseudo amino acid composition
- Using the concept of Chou's pseudo amino acid composition for risk type prediction of human papillomaviruses
- Predicting mycobacterial proteins subcellular locations by incorporating pseudo-average chemical shift into the general form of Chou's pseudo amino acid composition
- \textbf{iLoc-Virus}: a multi-label learning classifier for identifying the subcellular localization of virus proteins with both single and multiple sites
- GOASVM: a subcellular location predictor by incorporating term-frequency gene ontology into the general form of Chou's pseudo-amino acid composition
- iCDI-PseFpt: identify the channel-drug interaction in cellular networking with PseAAC and molecular fingerprints
- Extensions of Lipschitz mappings into a Hilbert space
- Near-Optimal Signal Recovery From Random Projections: Universal Encoding Strategies?
- Ridge Regression in Practice