-barrel transmembrane proteins: geometric modelling, detection of transmembrane region, and structural properties

DOI10.1016/J.COMPBIOLCHEM.2006.09.001MaRDI QIDQ884267zbMATH OpenOpenAlexDBLPWikidataFDO

Authors Ioannis K. Valavanis, Pantelis G. Bagos, Ioannis Z. Emiris

Publication date 13 June 2007

Published in Computational Biology and Chemistry (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1016/j.compbiolchem.2006.09.001

zbMATH Keywords

transmembrane region detection

Mathematics Subject Classification ID

Approximation methods and heuristics in mathematical programming (90C59) Biochemistry, molecular biology (92C40)

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Cites work

• An Interior Trust Region Approach for Nonlinear Minimization Subject to Bounds
• scientific article; zbMATH DE number 194544 (Why is no real title available?)

Cited in

(4)

• A method for discovering transmembrane beta-barrel proteins in Gram-negative bacterial proteomes
• Statistical analysis and exposure status classification of transmembrane beta barrel residues
• TMBETADISC-RBF: discrimination of \(\beta\)-barrel membrane proteins using RBF networks and PSSM profiles
• On permuted super-secondary structures of transmembrane \(\beta\)-barrel proteins

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