A cut-cell method for simulating spatial models of biochemical reaction networks in arbitrary geometries
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Reaction-diffusion equations (35K57) PDEs in connection with biology, chemistry and other natural sciences (35Q92) Probabilistic models, generic numerical methods in probability and statistics (65C20) Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06) Systems biology, networks (92C42)
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- scientific article; zbMATH DE number 1944194
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- A hybrid semi-Lagrangian cut cell method for advection-diffusion problems with Robin boundary conditions in moving domains
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- Analysis of nonlinear dynamics on arbitrary geometries with the virtual cell
- Simulating biochemical signaling networks in complex moving geometries
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- Discretised flux balance analysis for reaction-diffusion simulation of single-cell metabolism
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