Analysis of nonlinear dynamics on arbitrary geometries with the virtual cell

DOI10.1063/1.1350404zbMATH Open0992.92021OpenAlexW2048502394WikidataQ52015707 ScholiaQ52015707MaRDI QIDQ2728811FDOQ2728811

Authors: James C. Schaff, Boris M. Slepchenko, John Wagner, Diana Resasco, Leslie M. Loew, Y. S. Choi 

Publication date: 12 August 2001

Published in: Chaos (Search for Journal in Brave)

Full work available at URL: https://semanticscholar.org/paper/961d239fdacf8639a191f78bf6fda2e16d1dc211

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Mathematics Subject Classification ID

Probabilistic models, generic numerical methods in probability and statistics (65C20) Cell biology (92C37) Graphical methods in numerical analysis (65S05)

Cites Work

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Cited In (10)

• GemCell: A generic platform for modeling multi-cellular biological systems
• Incremental virtual work equation for geometric nonlinear analysis
• Diffusion on a curved surface coupled to diffusion in the volume: application to cell biology
• Heineken, Tsuchiya and Aris: ``On the mathematical status of the pseudo-steady state hypothesis. A classic from Volume 1 of \textit{Mathematical Biosciences}
• Protocell self-reproduction in a spatially extended metabolism-vesicle system
• Simulating cellular dynamics through a coupled transcription, translation, metabolic model.
• A simple axisymmetric extension to virtual cell embedding
• A fully adaptive reaction-diffusion integration scheme with applications to systems biology
• Computational Methods in Systems Biology
• A framework for whole-cell mathematical modeling

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