RNA Secondary Structure Prediction Via Energy Density Minimization

DOI10.1007/11732990_12MaRDI QIDQ3596313zbMATH OpenOpenAlexFDO

Authors

Publication date 30 August 2007

Published in Lecture Notes in Computer Science (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1007/11732990_12

zbMATH Keywords

energy density minimizationnon-coding RNARNA folding problemsecondary structure

Mathematics Subject Classification ID

Protein sequences, DNA sequences (92D20)

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Cited in

(4)

• Dynamic extended folding: modeling the RNA secondary structures during co-transcriptional folding
• RNA folding pathways and kinetics using 2D energy landscapes
• An RNA secondary structure prediction method based on minimum and suboptimal free energy structures
• RNA secondary structures and their prediction

Describes a project that uses

Uses Software

• Densityfold

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