ROWMAP -- a ROW-code with Krylov techniques for large stiff ODEs
Arnoldi methodKrylov subspace methodmethod of linesnumerical examplesRosenbrock-Wanner methodROWvery large stiff systems
Nonlinear ordinary differential equations and systems (34A34) Multiple scale methods for ordinary differential equations (34E13) Nonlinear parabolic equations (35K55) Numerical methods for initial value problems involving ordinary differential equations (65L05) Multistep, Runge-Kutta and extrapolation methods for ordinary differential equations (65L06) Method of lines for initial value and initial-boundary value problems involving PDEs (65M20)
This is a highly specialized paper devoted to relatively new methods of numerical approximation of solutions of initial value problems for ordinary differential equations (ODEs): \[ y'(t)=f(t,y(t)),\qquad y(t_0)=y_0. \] Methods of this kind are efficient mainly in the case of very large stiff systems. Such systems occur when, for example, the so-called method of lines is applied to approximation of certain problems of partial differential equations. The authors propose to incorporate a Krylov subspace technique into the so-called Rosenbrock-Wanner (ROW) method. This technique consists in replacing, in consecutive stages of the algorithm, the true Jacobian \(A\) of the function \(f\), by its lower rank approximation of the form \(Q_iQ_i^TA\). Here \(Q_i\) is, in general, a rectangular orthogonal matrix. Its columns are orthogonal vectors of the basis of the Krylov subspace. The matrix \(Q_i\) has to be computed by means of a certain modified Arnoldi orthogonalization process described in the paper. This technique results in some simplification of the algorithm, namely, in reducing of dimension of the linear systems to be solved. Since the systems are, generally, of very large dimension, this simplification may be important. The authors claim that the application of the proposed technique makes it possible to avoid storing of the full Jacobian, exploits the sparsity of the matrix and does not require any special structure of the matrix. In few numerical examples different methods are compared with ROWMAP.
- A row-type method for stiff differential equations
- Modified ROW methods for stiff problems
- A piecewise-linearized algorithm based on the Krylov subspace for solving stiff ODEs
- The row-oriented form of the regularized Kaczmarz's method
- A class of optimized row projection methods for solving large nonsymmetric linear systems
- scientific article; zbMATH DE number 177007
- Row Projection Methods for Large Nonsymmetric Linear Systems
- Parallel two-step ROW-methods for stiff delay differential equations
- A fast block Krylov implicit Runge-Kutta method for solving large-scale ordinary differential equations
- A comparison of AMF- and Krylov-methods in Matlab for large stiff ODE systems
- Adaptive Linear Equation Solvers in Codes for Large Stiff Systems of ODEs
- An Attempt to Avoid Exact Jacobian and Nonlinear Equations in the Numerical Solution of Stiff Differential Equations
- Automatic partitioning in linearly-implicit Runge-Kutta methods
- D-stability and Kaps-Rentrop-methods
- Efficient Solution of Parabolic Equations by Krylov Approximation Methods
- Equilibrium attractivity of Krylov-W-methods for nonlinear stiff ODEs
- Exponential Integrators for Large Systems of Differential Equations
- Generalized Runge-Kutta methods of order four with stepsize control for stiff ordinary differential equations
- GMRES: A Generalized Minimal Residual Algorithm for Solving Nonsymmetric Linear Systems
- scientific article; zbMATH DE number 50395 (Why is no real title available?)
- scientific article; zbMATH DE number 107583 (Why is no real title available?)
- scientific article; zbMATH DE number 177007 (Why is no real title available?)
- Krylov Subspace Methods for Solving Large Unsymmetric Linear Systems
- Matrix-free \(W\)-methods using a multiple Arnoldi iteration
- Matrix-Free Methods for Stiff Systems of ODE’s
- Solving Ordinary Differential Equations I
- VODE: A Variable-Coefficient ODE Solver
- W-Methods with Automatic Partitioning by Krylov Techniques for Large Stiff Systems
- Rotordynamic analysis of systems with a non-linear model of tilting pad bearings including turbulence effects
- Order results for Krylov-W-methods
- Equilibrium attractivity of Krylov-W-methods for nonlinear stiff ODEs
- Polynomial preconditioning in Krylov-ROW-methods
- Numerical experiments with Krylov integrators
- Parallel `peer' two-step W-methods and their application to MOL-systems.
- Design, analysis and testing of some parallel two-step W-methods for stiff systems
- Analysis of the dynamics of a slider-crank mechanism with hydrodynamic lubrication in the connecting rod-slider joint clearance
- Krylov-ROW methods for DAEs of index 1 with applications to viscoelasticity
- Mathematical modelling of cancer cell invasion of tissue: local and non-local models and the effect of adhesion
- Angiogenesis in bone fracture healing: a bioregulatory model
- Numerical experiments with some explicit pseudo two-step RK methods on a shared memory computer
- A novel nonlocal partial differential equation model of endothelial progenitor cell cluster formation during the early stages of vasculogenesis
- A comparison of one-step and two-step W-methods and peer methods with approximate matrix factorization
- A comparison of AMF- and Krylov-methods in Matlab for large stiff ODE systems
- Cell size, mechanical tension, and GTPase signaling in the single cell
- Cross-inhibition of Turing patterns explains the self-organized regulatory mechanism of planarian fission
- Modelling cell migration strategies in the extracellular matrix
- A model for spatio-temporal dynamics in a regulatory network for cell polarity
- Application of approximate matrix factorization to high order linearly implicit Runge-Kutta methods
- Oxygen as a critical determinant of bone fracture healing -- A multiscale model
- A comparison of Rosenbrock and ESDIRK methods combined with iterative solvers for unsteady compressible flows
- Some secant approximations for Rosenbrock \(W\)-methods
- Linearly-implicit two-step methods and their implementation in Nordsieck form
- New Rosenbrock W-methods of order 3 for partial differential algebraic equations of index
- Partitioning methods for reaction-diffusion problems
- Implicit peer methods for large stiff ODE systems
- Multi-implicit peer two-step W-methods for parallel time integration
- Cell repolarization: a bifurcation study of spatio-temporal perturbations of polar cells
- Efficient time-stepping techniques for simulating turbulent reactive flows with stiff chemistry
- A positive splitting method for mixed hyperbolic-parabolic systems
- Invasion generates periodic traveling waves (wavetrains) in predator-prey models with nonlocal dispersal
- Transport and anisotropic diffusion models for movement in oriented habitats
- Exponential Krylov peer integrators
- Mathematical modelling of cancer invasion: the importance of cell -- cell adhesion and cell -- matrix adhesion
- Analytical Jacobian-vector products for the matrix-free time integration of partial differential equations
- A low cost Arnoldi method for large linear initial value problems
- Exponential-Krylov methods for ordinary differential equations
- How does nonlocal dispersal affect the selection and stability of periodic traveling waves?
- Mathematical modelling of cancer invasion: implications of cell adhesion variability for tumour infiltrative growth patterns
- Convergence of a cancer invasion model to a logistic chemotaxis model
- Rosenbrock-Wanner methods: construction and mission
- Adaptive time stepping methods within a data assimilation framework applied to non-isothermal flow dynamics
- Nonlocal Adhesion Models for Microorganisms on Bounded Domains
- Boundedness of solutions of a non-local reaction–diffusion model for adhesion in cell aggregation and cancer invasion
- Jacobian-free high order local linearization methods for large systems of initial value problems
- Novel aspects in pattern formation arise from coupling Turing reaction-diffusion and chemotaxis
- Spatio-temporal chaos in a chemotaxis model
- Travelling waves in hyperbolic chemotaxis equations
- How does cellular contact affect differentiation mediated pattern formation?
- Mathematical modeling of cancer cell invasion of tissue: biological insight from mathematical analysis and computational simulation
- How cells stay together: a mechanism for maintenance of a robust cluster explored by local and non-local continuum models
- A family of three-stage third order AMF-W-methods for the time integration of advection diffusion reaction PDEs.
- A model of oscillatory protein dynamics in bacteria
- Modelling and simulation of collective cell migration with non-local interactions on time-dependent spatial domains
- Cellular adhesion impact on epidermal wound healing
- Continuous models for cell migration in tissues and applications to cell sorting via differential chemotaxis
- Adding adhesion to a chemical signaling model for somite formation
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