Simple computation of reaction-diffusion processes on point clouds

DOI10.1073/PNAS.1221408110MaRDI QIDQ5170968zbMATH OpenOpenAlexWikidataFDO

Authors Colin B. Macdonald, Barry Merriman, Steven J. Ruuth

Publication date 25 July 2014

Published in Proceedings of the National Academy of Sciences (Search for Journal in Brave)

Full work available at URL https://doi.org/10.1073/pnas.1221408110

Mathematics Subject Classification ID

Reaction-diffusion equations (35K57) Finite difference methods for initial value and initial-boundary value problems involving PDEs (65M06)

Recommendations

• An efficient numerical method for reaction-diffusion equation on the general curved surfaces
• A high-order kernel method for diffusion and reaction-diffusion equations on surfaces
• A radial basis function (RBF)-finite difference (FD) method for diffusion and reaction-diffusion equations on surfaces
• Bifurcation analysis of reaction diffusion systems on arbitrary surfaces
• A radial basis function (RBF) compact finite difference (FD) scheme for reaction-diffusion equations on surfaces

Cites work

• A diffuse-interface approach for modelling transport, diffusion and adsorption/desorption of material quantities on a deformable interface
• A grid based particle method for moving interface problems
• A grid based particle method for solving partial differential equations on evolving surfaces and modeling high order geometrical motion
• A simple embedding method for solving partial differential equations on surfaces
• An Eulerian formulation for solving partial differential equations along a moving interface
• An improvement of a recent Eulerian method for solving PDEs on general geometries
• Calculus on Surfaces with General Closest Point Functions
• Diffusion on a curved surface coupled to diffusion in the volume: application to cell biology
• Distributing many points on a sphere
• Eulerian finite element method for parabolic PDEs on implicit surfaces
• Geometric applications of the split Bregman method: segmentation and surface reconstruction
• scientific article; zbMATH DE number 2147460 (Why is no real title available?)
• Level set equations on surfaces via the closest point method
• The chemical basis of morphogenesis
• The Fast Gauss Transform
• The fast generalized Gauss transform
• The implicit closest point method for the numerical solution of partial differential equations on surfaces
• Variational problems and partial differential equations on implicit surfaces

Cited in

(35)

• Domain-growth-induced patterning for reaction-diffusion systems with linear cross-diffusion
• Convex variational methods on graphs for multiclass segmentation of high-dimensional data and point clouds
• A general-purpose, inelastic, rotation-free Kirchhoff-Love shell formulation for peridynamics
• First-passage time statistics on surfaces of general shape: surface PDE solvers using generalized moving least squares (GMLS)
• Diffusion generated methods for denoising target-valued images
• Turing conditions for pattern forming systems on evolving manifolds
• Turing-Hopf patterns on growing domains: the torus and the sphere
• Influence of curvature, growth, and anisotropy on the evolution of Turing patterns on growing manifolds
• The stability of localized spot patterns for the Brusselator on the sphere
• Localized Spot Patterns on the Sphere for Reaction-Diffusion Systems: Theory and Open Problems
• Spherical conformal parameterization of genus-0 point clouds for meshing
• Analysis and simulations of coupled bulk-surface reaction-diffusion systems on exponentially evolving volumes
• Projected finite elements for reaction-diffusion systems on stationary closed surfaces
• Solving Partial Differential Equations on Closed Surfaces with Planar Cartesian Grids
• Multiscale analysis and simulation of a signaling process with surface diffusion
• Schwarz Solvers and Preconditioners for the Closest Point Method
• Simulation and optimization of mean first passage time problems in 2-d using numerical embedded methods and perturbation theory
• Projected finite elements for systems of reaction-diffusion equations on closed evolving spheroidal surfaces
• Curved surface geometry-induced topological change of an excitable planar wavefront
• The linear stability of symmetric spike patterns for a bulk-membrane coupled Gierer-Meinhardt model
• Oscillatory translational instabilities of spot patterns in the Schnakenberg system on general 2D domains
• Virtual element method for elliptic bulk‐surface PDEs in three space dimensions
• A closest point method library for PDEs on surfaces with parallel domain decomposition solvers and preconditioners
• Global Polynomial Level Sets for Numerical Differential Geometry of Smooth Closed Surfaces
• Numerical solution of Allen-Cahn model on surfaces via an effective method based on generalized moving least squares (GMLS) approximation and the closest point approach
• Nearest neighbor sampling of point sets using rays
• A high-order fast direct solver for surface PDEs
• A convergence analysis of the parallel Schwarz solution of the continuous closest point method
• Optimized Schwarz domain decomposition algorithms for the closest point method on closed manifolds
• Greedy trial subspace selection in meshfree time-stepping scheme with applications in coupled bulk-surface pattern formations
• A novel localized least-squares collocation method for coupled bulk-surface problems
• A computational method for the coupled solution of reaction-diffusion equations on evolving domains and manifolds: application to a model of cell migration and chemotaxis
• The closest point method for surface PDEs with general boundary conditions
• Meshfree methods on manifolds for hydrodynamic flows on curved surfaces: a generalized moving least-squares (GMLS) approach
• Stability analysis of reaction-diffusion models on evolving domains: the effects of cross-diffusion

This page was built for publication: Simple computation of reaction-diffusion processes on point clouds

Report a bug (only for logged in users!)Click here to report a bug for this page (MaRDI item Q5170968)