Gromacs
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Software:16313
swMATH4128WikidataQ905302 ScholiaQ905302MaRDI QIDQ16313FDOQ16313
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Official website: http://www.gromacs.org/
Source code repository: https://github.com/ElsevierSoftwareX/SOFTX-D-15-00003
Cited In (only showing first 100 items - show all)
- Reactive molecular dynamics: numerical methods and algorithmic techniques
- IMD
- AMBER
- OOMPAA
- APBS
- CHARMM
- LAMMPS
- CPMD
- DESMOND
- PLUMED
- MCELL
- AdResS
- ESPResSo
- ZIBgridfree
- PNFFT
- PFC3D
- GROMOS
- Macrodox
- BioShape
- GANM
- AFMPB
- FFTSVD
- LINCS
- Cellware
- DL_POLY
- DL_POLY_3
- AutoDock Vina
- NAMD2
- PyMOL
- FMM-Yukawa
- GROWL
- QUESO
- Chimera
- ProtoMol
- Qmd-plot
- ZIBMolPy
- Salinas
- VADAR
- SETTLE
- SpAMM
- sPuReMD
- X-PLOR
- OVITO
- PROCHECK
- I-TASSER
- MDAnalysis
- SWISS-MODEL
- Megaman
- zPARES
- HOOMD-blue
- PuReMD
- MMM2D
- LBDEMcoupling
- VMD
- Open Babel
- OpenMM
- RUMD
- DynamO
- MOLDEN
- SG
- WHAM
- Wolf2Pack
- ACEMD
- CHARMM-GUI
- P-LINCS
- Apbsmem
- DeePMD-kit
- i-pi
- ElNemo
- ms2
- CCP4
- Mdtraj
- ACPYPE
- MarDyn
- Refprop
- TRAC-IK
- Metamacs
- RASPA
- MODELLER
- FMM3D
- SGN Sim
- EigenKernel
- EigenExa
- COILCHECK
- DrugscorePPI
- ESPResSo++
- SNPs3D
- SNPeffect
- MDSimAid
- NMRPipe
- StSNP
- Amp
- ELSES
- Intersurf
- CPPTRAJ
- PyRx
- PyTraj
- \textsf{ZIBgridfree}: efficient conformational analysis by partition-of-unity coupling
- A reference implementation of the adaptive resolution scheme in \texttt{ESPResSo}
- A meshless discretization method for Markov state models applied to explicit water peptide folding simulations
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