Provides functions to help in fitting models to data, to perform Monte Carlo, sensitivity and identifiability analysis. It is intended to work with models be written as a set of differential equations that are solved either by an integration routine from package 'deSolve', or a steady-state solver from package 'rootSolve'. However, the methods can also be used with other types of functions.
Cited in
(43)- A theoretical mathematical assessment of the effectiveness of coartemether in the treatment of \textit{Plasmodium falciparum} malaria infection
- Inference for differential equation models using relaxation via dynamical systems
- Pairing food and drink: a physiological model of blood ethanol levels for a variety of drinking behaviors
- Solving ODEs, DAEs, DDEs and PDEs in R
- Modeling nutrient and disease dynamics in a plant-pathogen system
- Mathematical model of radiation effects on thrombopoiesis in rhesus macaques and humans
- deSolve
- simecol
- BGX
- Chemotaxis
- BvpSolve
- RootSolve
- Grapham
- minpack.lm
- scaRabee
- BlenX
- ReacTran
- CollocInfer
- odesolve
- BGFit
- Dynamics of HIV-1 coinfection in different susceptible target cell populations during cell-free infection
- atmcmc
- GillespieSSA
- CLM
- GREENeR
- Modeling and predicting the influence of PM\(_{2.5}\) on children's respiratory diseases
- Automatically tuned general-purpose MCMC via new adaptive diagnostics
- Mathematical modeling of tumor and cancer stem cells treated with CAR-T therapy and inhibition of TGF-\(\beta\)
- biogrowth
- growthrates
- BCE
- Bayesian mechanistic modeling of thermodynamically controlled volatile fatty acid, hydrogen and methane production in the bovine rumen
- Laplace based approximate posterior inference for differential equation models
- ConsReg
- spsh
- DivE
- capm
- bioinactivation
- bioOED
- A modified Leslie-Gower predator-prey interaction model and parameter identifiability
- Bayesian calibration of the community land model using surrogates
- growthrates
- Multiple verification in complex biological systems: the bone remodelling case study
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