Mash

swMATH28785MaRDI QIDQ40499FDOQ40499

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Source code repository: https://github.com/marbl/Mash

Cited In (7)

• Estimating sequence similarity from read sets for clustering next-generation sequencing data
• \textit{De novo} clustering of long-read transcriptome data using a greedy, quality-value based algorithm
• An impossibility result for phylogeny reconstruction from \(k\)-mer counts
• Improving MinHash via the containment index with applications to metagenomic analysis
• Accurate Reconstruction of Microbial Strains from Metagenomic Sequencing Using Representative Reference Genomes
• Quantifying hierarchical conflicts in homology statements
• PathOGiST: A Novel Method for Clustering Pathogen Isolates by Combining Multiple Genotyping Signals

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