Fit linear and generalized linear mixed models with various extensions, including zero-inflation. The models are fitted using maximum likelihood estimation via 'TMB' (Template Model Builder). Random effects are assumed to be Gaussian on the scale of the linear predictor and are integrated out using the Laplace approximation. Gradients are calculated using automatic differentiation.
Cited in
(69)- Zero-inflated models for adjusting varying exposures: a cautionary note on the pitfalls of using offset
- Frequentist delta-variance approximations with mixed-effects models and TMB
- A comparison study on modeling of clustered and overdispersed count data for multiple comparisons
- A model-based approach to Spotify data analysis: a Beta GLMM
- Modeling random and non-random decision uncertainty in ratings data: a fuzzy beta model
- A sample covariance-based approach for spatial binary data
- fastGHQuad
- ADMB
- polynom
- AD Model Builder
- MCMCglmm
- Runuran
- daewr
- bbmle
- boral
- mvQuad
- clusterPower
- DHARMa
- TMB
- effects
- doRNG
- jagsUI
- hashmap
- dhglm
- ibd
- COMPoissonReg
- repeated
- RMUTIL
- blme
- HLMdiag
- SAS/ETS
- hnp
- COUNT
- model4you
- MouseTracker
- poisson.glm.mix
- DYFRAT
- tram
- trtf
- glmmboot
- GLMMadaptive
- swdpwr
- swCRTdesign
- SWSamp
- aghq
- mvprobit
- simr
- lefko3
- gmvjoint
- mecoturn
- DEGRE
- LongDat
- glmmSeq
- iccCounts
- twosigma
- glmmrBase
- gmvjoint
- PLmixed
- glmmADMB
- INLAjoint
- GLMMcosinor
- mtscr
- Flexible models for non-equidispersed count data: comparative performance of parametric models to deal with underdispersion
- A goodness-of-fit test for zero-inflated Poisson mixed effects models in tree abundance studies
- mpcmp
- GroupSortFuse
- dalmatian
- A multivariate frequency-severity framework for healthcare data breaches
- Market makers activity: behavioural and agent based approach
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