glmmTMB

Generalized Linear Mixed Models using Template Model Builder

Martin Maechler, Ben Bolker, Mollie Brooks, Kasper Kristensen, Arni Magnusson, Hans Skaug, Anders Nielsen, Casper Berg, Koen van Bentham

Last update: 7 October 2023

Software version identifier: 1.1.6, 1.1.7, 0.1.1, 0.1.4, 0.2.0, 0.2.1.0, 0.2.2.0, 0.2.3, 1.0.0, 1.0.1, 1.0.2.1, 1.1.1, 1.1.2.2, 1.1.2.3, 1.1.2, 1.1.3, 1.1.4, 1.1.5, 1.1.8

Source code repository: https://github.com/cran/glmmTMB

Copyright license: GNU Affero General Public License, version 3.0

Description

Fit linear and generalized linear mixed models with various extensions, including zero-inflation. The models are fitted using maximum likelihood estimation via 'TMB' (Template Model Builder). Random effects are assumed to be Gaussian on the scale of the linear predictor and are integrated out using the Laplace approximation. Gradients are calculated using automatic differentiation.