Statistical analysis about synonymous codons usage bias

MaRDI QIDQ2886370zbMATH OpenFDO

Authors Zechun Zhao

Publication date 1 June 2012

Published in Journal of Mathematics. Wuhan University (Search for Journal in Brave)

zbMATH Keywords

correlation analysiscorrespondence analysisgenes

Mathematics Subject Classification ID

Measures of association (correlation, canonical correlation, etc.) (62H20) Applications of statistics to biology and medical sciences; meta analysis (62P10) Biochemistry, molecular biology (92C40) Medical epidemiology (92C60)

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Cited in

(5)

• Analysis of codon use features of stearoyl-acyl carrier protein desaturase gene in \textit{Camellia sinensis}
• Intragenic codon bias in a set of mouse and human genes
• The positive selection estimated by a codon substitution model with codon usage bias
• COMPARING SYNONYMOUS CODON USAGE OF ALTERNATIVELY SPLICED GENES WITH NON-ALTERNATIVELY SPLICED GENES IN HUMAN GENOME
• Mathematical relations between codon bias indexes and their applications

Describes a project that uses

Uses Software

• SAS
• Matlab

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